Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1238
         (710 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   2.9  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    23   2.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.6  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   8.7  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   8.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   8.7  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 396 GTSHILFYHFSWKQTTSTKFINWALTLS 313
           G  H+LF HFS +Q     F    L +S
Sbjct: 145 GALHLLFRHFSQRQEVLQAFKQVQLLVS 172


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 396 GTSHILFYHFSWKQTTSTKFINWALTLS 313
           G  H+LF HFS +Q     F    L +S
Sbjct: 113 GALHLLFRHFSQRQEVLQAFKQVQLLVS 140


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 132 IEAKK*YFTVNINIYSYYHFYQQ 64
           +E K  YF  +I + +YY F +Q
Sbjct: 216 LENKLNYFIEDIGLNTYYFFLRQ 238


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 132 IEAKK*YFTVNINIYSYYHFYQQ 64
           +E K  YF  +I + +YY F +Q
Sbjct: 216 LENKLIYFIEDIGLNTYYFFLRQ 238


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 224 WGIEKIVTVVFRFISMHF 277
           WGI ++VT V   +S  F
Sbjct: 216 WGIAQVVTTVAGIVSYPF 233


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 224 WGIEKIVTVVFRFISMHF 277
           WGI ++VT V   +S  F
Sbjct: 216 WGIAQVVTTVAGIVSYPF 233


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -1

Query: 587 NKNGILFVGI 558
           +KNG+LFVG+
Sbjct: 310 SKNGVLFVGL 319


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,154
Number of Sequences: 438
Number of extensions: 3974
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)