Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1236
         (775 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    27   0.64 
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    27   0.85 
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   2.6  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       23   7.9  
AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    23   7.9  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 27.1 bits (57), Expect = 0.64
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +1

Query: 532 VRHKSTGLIMARKLIHLEVKPAIKKQIIRELKVLHECNFAHIVGFYGA 675
           V H+    ++AR+LIH + KP I + ++   + ++E     I  FYG+
Sbjct: 130 VAHRVVEQMVARELIHEDDKPVIARALLLRHRHVNENTHGGI--FYGS 175


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 26.6 bits (56), Expect = 0.85
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 412 TQRRRIEVFLCQKEKIGELSDDDFEKLGELGQGNGG 519
           + R ++ + L   E+  E SDDD    G   QG GG
Sbjct: 213 SNRNQVNLPLASPEEESEASDDDSGTEGGSSQGGGG 248


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 352  KSKTSIEALTERLEQIEMDDTQRRRIEVFLCQKEKIG 462
            + + S+ A  +RLE  +MD    + ++   C +EKIG
Sbjct: 922  QQQNSMLATQQRLEASQMDQGTDQPMQESPCNEEKIG 958


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 726 PSIHVFHAYRDLAITIECSIEANYMRKVTFMKY 628
           PS   FHA R     I  +++ N ++   F KY
Sbjct: 352 PSEFEFHANRPFMFLIRRTMDGNVLQVGNFSKY 384


>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 307 LKSATANDRRQGLAGKSKTSIEALTERLEQIEMDDTQR 420
           LK    N+    L  +   S+ AL ERL+ +E+D+  +
Sbjct: 91  LKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMK 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,615
Number of Sequences: 2352
Number of extensions: 12557
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)