Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1234
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070618-1|AAL48089.1|  318|Drosophila melanogaster RE72002p pro...    30   1.8  
AE014134-3511|AAF57215.3|  318|Drosophila melanogaster CG3305-PA...    30   1.8  

>AY070618-1|AAL48089.1|  318|Drosophila melanogaster RE72002p
           protein.
          Length = 318

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +1

Query: 364 TAKPL--KSANTSRPRIITPESDSLRQNPAPALKIAVPP-PLILREKAAWNRVCQALK-A 531
           T KP+  +S +T  PR  TP ++S     AP +   + P P       AWN  C  L+ A
Sbjct: 63  TEKPITTRSTSTITPRSTTPSTES-PSTTAPVISTTIAPQPYPQPSIGAWNTSCIMLQMA 121

Query: 532 NKINY 546
            ++N+
Sbjct: 122 AQLNF 126


>AE014134-3511|AAF57215.3|  318|Drosophila melanogaster CG3305-PA
           protein.
          Length = 318

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = +1

Query: 364 TAKPL--KSANTSRPRIITPESDSLRQNPAPALKIAVPP-PLILREKAAWNRVCQALK-A 531
           T KP+  +S +T  PR  TP ++S     AP +   + P P       AWN  C  L+ A
Sbjct: 63  TEKPITTRSTSTITPRSTTPSTES-PSTTAPVISTTIAPQPYPQPSIGAWNTSCIMLQMA 121

Query: 532 NKINY 546
            ++N+
Sbjct: 122 AQLNF 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.311    0.125    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,707,494
Number of Sequences: 53049
Number of extensions: 313027
Number of successful extensions: 607
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)