Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1225
         (595 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022632-1|AAY55048.1|  506|Drosophila melanogaster IP11994p pro...    31   1.6  
BT022496-1|AAY54912.1|  500|Drosophila melanogaster IP11794p pro...    31   1.6  
AE014297-2243|AAF55344.1|  496|Drosophila melanogaster CG14893-P...    31   1.6  
AE014134-3385|AAN11116.1|  381|Drosophila melanogaster CG31622-P...    29   3.6  

>BT022632-1|AAY55048.1|  506|Drosophila melanogaster IP11994p
           protein.
          Length = 506

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -2

Query: 162 ILQKKKNEVKSFIIQNVSLYSLAPTRRDLRLTTEFVK 52
           I Q  K++ +   I   ++Y+LAP+ ++L L T+F+K
Sbjct: 298 IWQTSKDKSQRNAISQPAIYTLAPSEKNLLLNTDFIK 334


>BT022496-1|AAY54912.1|  500|Drosophila melanogaster IP11794p
           protein.
          Length = 500

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -2

Query: 162 ILQKKKNEVKSFIIQNVSLYSLAPTRRDLRLTTEFVK 52
           I Q  K++ +   I   ++Y+LAP+ ++L L T+F+K
Sbjct: 292 IWQTSKDKSQRNAISQPAIYTLAPSEKNLLLNTDFIK 328


>AE014297-2243|AAF55344.1|  496|Drosophila melanogaster CG14893-PA
           protein.
          Length = 496

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -2

Query: 162 ILQKKKNEVKSFIIQNVSLYSLAPTRRDLRLTTEFVK 52
           I Q  K++ +   I   ++Y+LAP+ ++L L T+F+K
Sbjct: 302 IWQTSKDKSQRNAISQPAIYTLAPSEKNLLLNTDFIK 338


>AE014134-3385|AAN11116.1|  381|Drosophila melanogaster CG31622-PD,
           isoform D protein.
          Length = 381

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
 Frame = +2

Query: 68  VKRRSLR-VGAKEYKLTF--CIIKLFTSFFFFCKIKVLIIIFVSIKLVLYSCFVSLH--V 232
           V+ R+L+ +G   + + F  C+++   S      + ++ ++ ++  L++YS +   H  +
Sbjct: 11  VQLRTLKWLGVLRFTIDFNKCLVRENASEERSAWLYLIGVVGITCSLIVYSTYFPSHFIM 70

Query: 233 GRHSRQGRRYARGNVRERDIDSASIF 310
           G+H+  G  YA  N+R   I +  I+
Sbjct: 71  GKHNTTGNCYALINIRSCSIVTMLIY 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,619,112
Number of Sequences: 53049
Number of extensions: 352092
Number of successful extensions: 997
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)