Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1224
         (766 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003501-1|AAH03501.1|  416|Homo sapiens chromosome 20 open read...    31   6.0  
AY359076-1|AAQ89435.1|  372|Homo sapiens C20orf3 protein.              31   6.0  
AL035661-4|CAB75499.1|  416|Homo sapiens chromosome 20 open read...    31   6.0  
AK026866-1|BAB15578.1|  220|Homo sapiens protein ( Homo sapiens ...    31   6.0  
AK025834-1|BAB15253.1|  220|Homo sapiens protein ( Homo sapiens ...    31   6.0  
AB033767-1|BAB11885.1|  429|Homo sapiens BSCv protein.                 31   6.0  

>BC003501-1|AAH03501.1|  416|Homo sapiens chromosome 20 open reading
           frame 3 protein.
          Length = 416

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 16  LVVKINSTQTSLEKFPNRSEVSELSSQGTSRRTLNVPQG 132
           ++ K+ S +T ++  P  S V ELS  G  RR+L+ P G
Sbjct: 344 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 382


>AY359076-1|AAQ89435.1|  372|Homo sapiens C20orf3 protein.
          Length = 372

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 16  LVVKINSTQTSLEKFPNRSEVSELSSQGTSRRTLNVPQG 132
           ++ K+ S +T ++  P  S V ELS  G  RR+L+ P G
Sbjct: 300 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 338


>AL035661-4|CAB75499.1|  416|Homo sapiens chromosome 20 open reading
           frame 3 protein.
          Length = 416

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 16  LVVKINSTQTSLEKFPNRSEVSELSSQGTSRRTLNVPQG 132
           ++ K+ S +T ++  P  S V ELS  G  RR+L+ P G
Sbjct: 344 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 382


>AK026866-1|BAB15578.1|  220|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23213 fis, clone ADSU01581. ).
          Length = 220

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 16  LVVKINSTQTSLEKFPNRSEVSELSSQGTSRRTLNVPQG 132
           ++ K+ S +T ++  P  S V ELS  G  RR+L+ P G
Sbjct: 148 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 186


>AK025834-1|BAB15253.1|  220|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22181 fis, clone HRC00945. ).
          Length = 220

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 16  LVVKINSTQTSLEKFPNRSEVSELSSQGTSRRTLNVPQG 132
           ++ K+ S +T ++  P  S V ELS  G  RR+L+ P G
Sbjct: 148 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 186


>AB033767-1|BAB11885.1|  429|Homo sapiens BSCv protein.
          Length = 429

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 16  LVVKINSTQTSLEKFPNRSEVSELSSQGTSRRTLNVPQG 132
           ++ K+ S +T ++  P  S V ELS  G  RR+L+ P G
Sbjct: 357 MIFKLFSQETVMKFVPRYSLVLELSDSGAFRRSLHDPDG 395


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,951,775
Number of Sequences: 237096
Number of extensions: 1844188
Number of successful extensions: 6560
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6560
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)