Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1218
         (769 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139833-1|AAZ73162.1| 1235|Homo sapiens GrinchGEF protein.            31   4.5  
BC065561-1|AAH65561.1|  832|Homo sapiens ARHGEF10L protein protein.    31   4.5  
AL358593-3|CAH74137.1| 1052|Homo sapiens Rho guanine nucleotide ...    31   4.5  
AK092020-1|BAC03792.1|  633|Homo sapiens protein ( Homo sapiens ...    31   4.5  
AK001383-1|BAA91663.1|  596|Homo sapiens protein ( Homo sapiens ...    31   4.5  
BC035558-1|AAH35558.1| 1025|Homo sapiens N-acetyltransferase 10 ...    30   7.9  
BC020205-1|AAH20205.1|  554|Homo sapiens Unknown (protein for IM...    30   7.9  
AK022241-1|BAB13995.1| 1025|Homo sapiens protein ( Homo sapiens ...    30   7.9  
AK001636-1|BAA91800.1| 1011|Homo sapiens protein ( Homo sapiens ...    30   7.9  
AB051496-1|BAB21800.1| 1028|Homo sapiens KIAA1709 protein protein.     30   7.9  

>DQ139833-1|AAZ73162.1| 1235|Homo sapiens GrinchGEF protein.
          Length = 1235

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 19/77 (24%), Positives = 42/77 (54%)
 Frame = +2

Query: 77  VSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGIHDNRLNNKKIRNYYLK 256
           V+ ++ L K+  D +  + + +  ++ + L C+ LT++V  YG     + +K+ R + L 
Sbjct: 471 VAEIQQLTKSVSDRSSLNKLLTSGQR-QLLLCETLTETV--YGDRGQLIKSKERRVFLLN 527

Query: 257 KICILLDLNFKHVIESS 307
            + +  ++NFK  +E S
Sbjct: 528 DMLVCANINFKGQLEIS 544


>BC065561-1|AAH65561.1|  832|Homo sapiens ARHGEF10L protein protein.
          Length = 832

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 19/77 (24%), Positives = 42/77 (54%)
 Frame = +2

Query: 77  VSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGIHDNRLNNKKIRNYYLK 256
           V+ ++ L K+  D +  + + +  ++ + L C+ LT++V  YG     + +K+ R + L 
Sbjct: 68  VAEIQQLTKSVSDRSSLNKLLTSGQR-QLLLCETLTETV--YGDRGQLIKSKERRVFLLN 124

Query: 257 KICILLDLNFKHVIESS 307
            + +  ++NFK  +E S
Sbjct: 125 DMLVCANINFKGQLEIS 141


>AL358593-3|CAH74137.1| 1052|Homo sapiens Rho guanine nucleotide
           exchange factor (GEF) 10-like protein.
          Length = 1052

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 19/77 (24%), Positives = 42/77 (54%)
 Frame = +2

Query: 77  VSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGIHDNRLNNKKIRNYYLK 256
           V+ ++ L K+  D +  + + +  ++ + L C+ LT++V  YG     + +K+ R + L 
Sbjct: 288 VAEIQQLTKSVSDRSSLNKLLTSGQR-QLLLCETLTETV--YGDRGQLIKSKERRVFLLN 344

Query: 257 KICILLDLNFKHVIESS 307
            + +  ++NFK  +E S
Sbjct: 345 DMLVCANINFKGQLEIS 361


>AK092020-1|BAC03792.1|  633|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34701 fis, clone MESAN2002724, weakly similar to
           Rho guanine nucleotide exchange factor (GEF) 10. ).
          Length = 633

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 19/77 (24%), Positives = 42/77 (54%)
 Frame = +2

Query: 77  VSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGIHDNRLNNKKIRNYYLK 256
           V+ ++ L K+  D +  + + +  ++ + L C+ LT++V  YG     + +K+ R + L 
Sbjct: 218 VAEIQQLTKSVSDRSSLNKLLTSGQR-QLLLCETLTETV--YGDRGQLIKSKERRVFLLN 274

Query: 257 KICILLDLNFKHVIESS 307
            + +  ++NFK  +E S
Sbjct: 275 DMLVCANINFKGQLEIS 291


>AK001383-1|BAA91663.1|  596|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10521 fis, clone NT2RP2000841. ).
          Length = 596

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 19/77 (24%), Positives = 42/77 (54%)
 Frame = +2

Query: 77  VSLLKSLIKTQIDENVSDNIKSMSEKLKRLECDNLTDSVEIYGIHDNRLNNKKIRNYYLK 256
           V+ ++ L K+  D +  + + +  ++ + L C+ LT++V  YG     + +K+ R + L 
Sbjct: 39  VAEIQQLTKSVSDRSSLNKLLTSGQR-QLLLCETLTETV--YGDRGQLIKSKERRVFLLN 95

Query: 257 KICILLDLNFKHVIESS 307
            + +  ++NFK  +E S
Sbjct: 96  DMLVCANINFKGQLEIS 112


>BC035558-1|AAH35558.1| 1025|Homo sapiens N-acetyltransferase 10
           protein.
          Length = 1025

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 380 ERRLKNFNLNINYDGPVKIFVAAT 451
           ++++KN  LNI  D P ++F+AAT
Sbjct: 77  QKKIKNGTLNIKQDDPFELFIAAT 100


>BC020205-1|AAH20205.1|  554|Homo sapiens Unknown (protein for
           IMAGE:4857480) protein.
          Length = 554

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 380 ERRLKNFNLNINYDGPVKIFVAAT 451
           ++++KN  LNI  D P ++F+AAT
Sbjct: 77  QKKIKNGTLNIKQDDPFELFIAAT 100


>AK022241-1|BAB13995.1| 1025|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12179 fis, clone MAMMA1000738, moderately
           similar to HYPOTHETICAL 116.5 KD PROTEIN C20G8.09C IN
           CHROMOSOME I. ).
          Length = 1025

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 380 ERRLKNFNLNINYDGPVKIFVAAT 451
           ++++KN  LNI  D P ++F+AAT
Sbjct: 77  QKKIKNGTLNIKQDDPFELFIAAT 100


>AK001636-1|BAA91800.1| 1011|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10774 fis, clone NT2RP4000290. ).
          Length = 1011

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 380 ERRLKNFNLNINYDGPVKIFVAAT 451
           ++++KN  LNI  D P ++F+AAT
Sbjct: 77  QKKIKNGTLNIKQDDPFELFIAAT 100


>AB051496-1|BAB21800.1| 1028|Homo sapiens KIAA1709 protein protein.
          Length = 1028

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +2

Query: 380 ERRLKNFNLNINYDGPVKIFVAAT 451
           ++++KN  LNI  D P ++F+AAT
Sbjct: 80  QKKIKNGTLNIKQDDPFELFIAAT 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,337,529
Number of Sequences: 237096
Number of extensions: 1327118
Number of successful extensions: 3137
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3137
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)