Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1213
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   3.4  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    23   4.5  
AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    23   5.9  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   7.9  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -1

Query: 160 LNRRFLERRLTDDMLRKRVSITADRCTDSAAHKCNYELFNR 38
           +++   +  +  ++L    +I +D   DS+   CN E FN+
Sbjct: 620 ISKELTKASIIQEILNIPTTIASDVAFDSSDFPCNSEEFNK 660


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal
          protein rpL7a protein.
          Length = 271

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +2

Query: 2  VIPAPIAYTKIVAVKKLV 55
          V PAP+A  K V VKK+V
Sbjct: 17 VAPAPLAKPKKVEVKKVV 34


>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 31  NCCG*KARSCICAPRCRCTDP 93
           NC   KA  C+ A    C DP
Sbjct: 120 NCFRQKAEQCLAANTSPCNDP 140


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 70  PRCRCTDPR*Y*HVCGA 120
           P+  CTDPR   + CG+
Sbjct: 54  PKIECTDPREVYNECGS 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,010
Number of Sequences: 2352
Number of extensions: 8821
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)