Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1213
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   5.6  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   5.6  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   5.6  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   5.6  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   5.6  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   5.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   5.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   5.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.7  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   9.7  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   9.7  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 76  SAAHKCNYELFNRNNFSIRYWSWNY 2
           S ++  NY  +N NN+    ++ NY
Sbjct: 84  SLSNNYNYSNYNNNNYKQLCYNINY 108


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 76  SAAHKCNYELFNRNNFSIRYWSWNY 2
           S ++  NY  +N NN+    ++ NY
Sbjct: 84  SLSNNYNYSNYNNNNYKQLCYNINY 108


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 76  SAAHKCNYELFNRNNFSIRYWSWNY 2
           S ++  NY  +N NN+    ++ NY
Sbjct: 84  SLSNNYNYSNYNNNNYKQLCYNINY 108


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 76  SAAHKCNYELFNRNNFSIRYWSWNY 2
           S ++  NY  +N NN+    ++ NY
Sbjct: 84  SLSNNYNYSNYNNNNYKQLCYNINY 108


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 76  SAAHKCNYELFNRNNFSIRYWSWNY 2
           S ++  NY  +N NN+    ++ NY
Sbjct: 84  SLSNNYNYSNYNNNNYKQLCYNINY 108


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 371 VAIRMPPVIPINH 333
           +A+  PPV+P NH
Sbjct: 353 LAVPAPPVLPENH 365


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 371 VAIRMPPVIPINH 333
           +A+  PPV+P NH
Sbjct: 353 LAVPAPPVLPENH 365


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 371 VAIRMPPVIPINH 333
           +A+  PPV+P NH
Sbjct: 353 LAVPAPPVLPENH 365


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -2

Query: 306 IEPRSYSIIPCTKYSSSIFSPL 241
           I  R++ ++    YS+S F+P+
Sbjct: 302 ISGRAFQVLTWLGYSNSAFNPI 323


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 58  NYELFNRNNFSIRYWSWNY 2
           NY   N NN+   Y++ NY
Sbjct: 95  NYNNNNYNNYKKLYYNINY 113


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 58  NYELFNRNNFSIRYWSWNY 2
           NY   N NN+   Y++ NY
Sbjct: 105 NYNNNNYNNYKKLYYNINY 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,980
Number of Sequences: 438
Number of extensions: 2905
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)