Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1211
         (785 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.2  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   7.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 470 GIHKPGKPTNETSSYRPISLLST 538
           G  KP KP + ++S  P S+ S+
Sbjct: 585 GTEKPDKPASSSASSAPTSVCSS 607


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 769 TVVPDFVERLRDVEEEGAGRDLFTPI*SYQNVL 671
           T   D +E++  VEEE       TP+   Q V+
Sbjct: 25  TSTSDEIEKITTVEEEKICHKAITPLDRLQRVV 57


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 230 REVERRASLPPSDAL 274
           RE+E+R S+P +D L
Sbjct: 397 REMEKRQSVPANDLL 411


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 224 VDREVERRASLPPSDALPPITADEVRDAIHNLQP 325
           +++  ER   L  SDAL  I +      +HN  P
Sbjct: 442 LEKTYERDTCLLASDALKQILSAAYNVELHNSSP 475


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 224 VDREVERRASLPPSDALPPITADEVRDAIHNLQP 325
           +++  ER   L  SDAL  I +      +HN  P
Sbjct: 480 LEKTYERDTCLLASDALKQILSAAYNVELHNSSP 513


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,938
Number of Sequences: 438
Number of extensions: 4887
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)