Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1202
(580 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 42 1e-05
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 40 8e-05
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 39 1e-04
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 38 2e-04
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 36 7e-04
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 34 0.004
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 34 0.004
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 33 0.009
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 33 0.009
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 30 0.062
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 30 0.062
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 29 0.083
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 28 0.19
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 27 0.33
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 27 0.44
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 27 0.58
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 27 0.58
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 1.8
DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein O-fucosylt... 24 4.1
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 7.2
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 9.5
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 41.9 bits (94), Expect = 1e-05
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = -2
Query: 384 KYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKV---TLYKTCIRPV 214
K LGV LDS + F+ HI V R +LG + R+ RN + +Y +R V
Sbjct: 845 KDLGVLLDSSLNFKQHIDDVVARGNQLLG-----VVIRTTNEFRNPMCIKAVYNCIVRSV 899
Query: 213 MTYASVVFAHAARIHLKSFQIIQSRFCRIAVG-APWFVRN 97
+ Y+ VV++ + + IQ + R A+ PW RN
Sbjct: 900 LEYSCVVWSPTTASSIARIEAIQRKLTRYALRLLPWQDRN 939
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 39.5 bits (88), Expect = 8e-05
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = -2
Query: 402 TVGPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCI 223
T ++YLGVTL ++++ PH+K V +RA I ++ R +K L +
Sbjct: 725 TSSRSIRYLGVTLQDKLSWLPHVKEVTERAGKIADATSRLL-RNHSEPRASKAKLLASVS 783
Query: 222 RPVMTYASVVFA 187
VM YA+ V++
Sbjct: 784 ESVMRYAAPVWS 795
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 38.7 bits (86), Expect = 1e-04
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICR-RSKMSLRNKVTLYKTCIRPVM 211
++ LG+ LDSR+ F+ + V +A LG + R + LRN LY +RP++
Sbjct: 773 IRDLGIILDSRLNFKLQLDEVLLKANRTLGFILRFTSIFRDQSFLRN---LYYALVRPLL 829
Query: 210 TYASVVFAHAARIHLKSFQIIQSRFCRIA 124
YAS+++ + IQ F R+A
Sbjct: 830 EYASIIWNPPTIDGCSRIESIQRLFTRVA 858
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 38.3 bits (85), Expect = 2e-04
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 208
+KYLG+ +D R+ + HIK V +RA L M+ RS + + T I +
Sbjct: 714 LKYLGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNRSGPRSSRRRIIANTIIAGI-R 772
Query: 207 YASVVFAHAARIHLK 163
YAS ++A + + +
Sbjct: 773 YASSIWAESLKFECR 787
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 36.3 bits (80), Expect = 7e-04
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 208
+KYLG+ LD R+ + HI+ +RA + L M+ ++ S + + T + V
Sbjct: 709 LKYLGMVLDDRLEYTSHIRYAVERATKLWTTLVRMMPNKAGPSSNVRRVIALTVVAKV-R 767
Query: 207 YASVVFAHAAR 175
YAS ++ H R
Sbjct: 768 YASPIWCHTLR 778
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 33.9 bits (74), Expect = 0.004
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 208
++YLGV L +++RPH++ V D+A ++ L ++ S + +K L ++
Sbjct: 740 IRYLGVMLHDHLSWRPHVEMVADKALRVVRALRGIMRNHSGPQV-SKRKLLAAVAASIIR 798
Query: 207 YASVVFAHA 181
Y + V+ A
Sbjct: 799 YGAPVWTEA 807
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 33.9 bits (74), Expect = 0.004
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = -2
Query: 432 HI**DVR-PAHTVGPKVKYLGVTLDSRMTFRPHIKTVRDRAAFI---LGRLYPMICRRSK 265
HI DVR A +K+LGV + +++ PH+ V RA I +GRL P R K
Sbjct: 734 HISIDVRGTAVPYSRSIKHLGVLVHDHLSWIPHVTAVTQRAVQIAQAVGRLMPN-HRGPK 792
Query: 264 MSLRNKVTLYKTCIRPVMTYASVVFAHA 181
MS K L VM YA+ V+ A
Sbjct: 793 MS---KSRLLAAVADSVMRYAAPVWHEA 817
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 32.7 bits (71), Expect = 0.009
Identities = 17/73 (23%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRS-KMSLRNKVTLYKTCIRPVM 211
++YLGV L + +R H+ V ++A+ ++ + ++ S + ++++ Y V+
Sbjct: 790 IRYLGVQLQDHLKWRDHVTKVSEKASRVVAAVTRLMQNHSGPRTAKSRLLAY--VAESVL 847
Query: 210 TYASVVFAHAARI 172
YA+ V+A A ++
Sbjct: 848 RYAAPVWAEATQV 860
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 32.7 bits (71), Expect = 0.009
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 208
++YLGVTL +++ PH++ V RA I + ++ R +K L + V+
Sbjct: 797 MRYLGVTLHDHLSWLPHVREVTTRARKIADAVTRLL-RNHSGPKTSKARLLASVAESVIR 855
Query: 207 YASVVF 190
YA+ ++
Sbjct: 856 YAAPIW 861
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 29.9 bits (64), Expect = 0.062
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIK 331
+KYLGV +D R++FR H++
Sbjct: 705 LKYLGVIIDDRLSFRKHVE 723
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 29.9 bits (64), Expect = 0.062
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRD---RAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRP 217
+KYLGV +D R+ F+ H++ +A L P I S+R L+ C
Sbjct: 766 LKYLGVVIDDRLKFKSHLEEACKKVMKAINALAAFTPNIGGPCS-SIRR---LHANCAIS 821
Query: 216 VMTYASVVFAH 184
V+ Y + V+AH
Sbjct: 822 VLRYGAPVWAH 832
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 29.5 bits (63), Expect = 0.083
Identities = 15/69 (21%), Positives = 36/69 (52%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 208
++YLGV + ++++PH++ +A ++G + ++ S + K L ++
Sbjct: 737 IRYLGVQIHDHLSWKPHVELSTAKALRVVGVVTAVMRNHSGPQVA-KRRLLAAVAESIIR 795
Query: 207 YASVVFAHA 181
YA+ V++ A
Sbjct: 796 YAAPVWSEA 804
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 28.3 bits (60), Expect = 0.19
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFIL 301
+KYLGV L +++ PH+K V +A I+
Sbjct: 745 LKYLGVRLHYNLSWVPHVKAVIQKATQIV 773
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 27.5 bits (58), Expect = 0.33
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFIL 301
+KYLGV + + +++ PH+K + +A I+
Sbjct: 806 IKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.1 bits (57), Expect = 0.44
Identities = 19/93 (20%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 208
++YLGV +D++++++ H++ + A + + R K L + + ++
Sbjct: 751 IRYLGVVIDNQLSWKSHVEYCTTK-ALRTAKALGCLMRNHSGPKCAKRRLLASVVDSILR 809
Query: 207 YASVVFAHAARIHLKSFQIIQ--SRFCRIAVGA 115
YA+ V+ H A + + +++Q + C I V +
Sbjct: 810 YAAPVW-HEATKNQECRRMLQRVQKHCAIKVSS 841
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 26.6 bits (56), Expect = 0.58
Identities = 18/61 (29%), Positives = 23/61 (37%)
Frame = -3
Query: 440 RNTISNKMFDQPIPWAPRSNI*ASPSTVG*HSAPTSRRYAIVPPSF*DVSTR*YVGEVKC 261
R SN D P P + + +T S P +R + PPS S R V C
Sbjct: 1328 RRNSSNSKHDLMSPCKPTNGSLSPSATHSRFSTPGARSLPLTPPSVPYASDRPPVATFSC 1387
Query: 260 P 258
P
Sbjct: 1388 P 1388
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 26.6 bits (56), Expect = 0.58
Identities = 18/61 (29%), Positives = 23/61 (37%)
Frame = -3
Query: 440 RNTISNKMFDQPIPWAPRSNI*ASPSTVG*HSAPTSRRYAIVPPSF*DVSTR*YVGEVKC 261
R SN D P P + + +T S P +R + PPS S R V C
Sbjct: 1325 RRNSSNSKHDLMSPCKPTNGSLSPSATHSRFSTPGARSLPLTPPSVPYASDRPPVATFSC 1384
Query: 260 P 258
P
Sbjct: 1385 P 1385
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 25.0 bits (52), Expect = 1.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRA 313
++YLGV + +RPH+ ++A
Sbjct: 734 IRYLGVMIHDHFLWRPHVTMAVEKA 758
>DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein
O-fucosyltransferase 2 protein.
Length = 451
Score = 23.8 bits (49), Expect = 4.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 169 VYAGRVSEHYTCIGHDGAYASF 234
V+ + EH GHDGA A F
Sbjct: 171 VFVDKFEEHVCPKGHDGALAYF 192
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.0 bits (47), Expect = 7.2
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = -2
Query: 201 SVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFD 22
S V H+ R + ++S ++ G + R+ + D K+ + S RH D
Sbjct: 576 SFVVEHSRRDRDRDRDRMRSDSGKVGGGGGGYDRDDYRRTEKDYRGNGKHDKYGSSRHSD 635
Query: 21 KAARHEN 1
++RH +
Sbjct: 636 SSSRHRS 642
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 22.6 bits (46), Expect = 9.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRL 292
+KYLGV L + H++ V ++A+ I L
Sbjct: 726 LKYLGVDLCRKQHHSRHLERVANKASRITNAL 757
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,801
Number of Sequences: 2352
Number of extensions: 12283
Number of successful extensions: 32
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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