Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1202
(580 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 106 2e-23
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 95 8e-20
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 94 1e-19
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 94 1e-19
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 93 3e-19
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 93 3e-19
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 87 1e-17
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 87 1e-17
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 83 3e-16
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 64 1e-10
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 64 1e-10
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 64 1e-10
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 64 2e-10
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 57 2e-08
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 55 6e-08
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 55 6e-08
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 55 6e-08
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 55 6e-08
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 55 6e-08
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 54 1e-07
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 54 1e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 36 0.030
AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p pro... 31 0.85
AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA... 31 0.85
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 30 2.0
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 106 bits (255), Expect = 2e-23
Identities = 50/128 (39%), Positives = 72/128 (56%)
Frame = -2
Query: 384 KYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 205
KYLGV LD R+TF H+ +R R + + Y ++ RSK+SL NK+T+YK + P Y
Sbjct: 746 KYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKY 805
Query: 204 ASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 25
++ A H+K Q IQ++ R+ G WFVRN LH DL L ++ + S R+
Sbjct: 806 GCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYH 865
Query: 24 DKAARHEN 1
D+ RH N
Sbjct: 866 DRLERHRN 873
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 94.7 bits (225), Expect = 8e-20
Identities = 43/130 (33%), Positives = 74/130 (56%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
+ KYLG+TLD R+TF PH+K R + +L ++ R+S M+LR K +Y C+ P+
Sbjct: 750 QAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIW 809
Query: 210 TYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMR 31
Y ++ AA+ + Q++Q+R R P++VR LH DL+L ++ + + + R
Sbjct: 810 LYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSR 869
Query: 30 HFDKAARHEN 1
+ D+ RH +
Sbjct: 870 YSDRLRRHHS 879
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 93.9 bits (223), Expect = 1e-19
Identities = 45/130 (34%), Positives = 74/130 (56%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
+V YLGV LD R+T+R HI+ L+ +I RS +SL K LY + ++P+
Sbjct: 735 EVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIW 794
Query: 210 TYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMR 31
TY S ++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + + +
Sbjct: 795 TYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTK 854
Query: 30 HFDKAARHEN 1
+ +K H N
Sbjct: 855 YNEKLTTHTN 864
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 93.9 bits (223), Expect = 1e-19
Identities = 45/130 (34%), Positives = 74/130 (56%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
+V YLGV LD R+T+R HI+ L+ +I RS +SL K LY + ++P+
Sbjct: 735 EVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIW 794
Query: 210 TYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMR 31
TY S ++ +A+R ++ Q QSR RI GAPW++RN ++H DL ++ + + + +
Sbjct: 795 TYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTK 854
Query: 30 HFDKAARHEN 1
+ +K H N
Sbjct: 855 YNEKLTTHTN 864
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 92.7 bits (220), Expect = 3e-19
Identities = 43/128 (33%), Positives = 74/128 (57%)
Frame = -2
Query: 384 KYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 205
KYLG+TLD ++TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 751 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 810
Query: 204 ASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 25
V+ AA+ HL +I+Q++ R GAPW++R D+ DL + + LQ+ + ++
Sbjct: 811 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYM 870
Query: 24 DKAARHEN 1
++ H N
Sbjct: 871 ERLNVHPN 878
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 92.7 bits (220), Expect = 3e-19
Identities = 43/128 (33%), Positives = 74/128 (57%)
Frame = -2
Query: 384 KYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 205
KYLG+TLD ++TF HI ++ + R+ +I R+K+SL KV +YK+ + P + Y
Sbjct: 553 KYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFY 612
Query: 204 ASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHF 25
V+ AA+ HL +I+Q++ R GAPW++R D+ DL + + LQ+ + ++
Sbjct: 613 GLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYL 672
Query: 24 DKAARHEN 1
++ H N
Sbjct: 673 ERLNVHPN 680
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 87.4 bits (207), Expect = 1e-17
Identities = 35/114 (30%), Positives = 67/114 (58%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 208
++YLG+ D ++TF+ HI + I+ LYP+I R+SK+S+ NK+ ++KT P++
Sbjct: 770 IRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILM 829
Query: 207 YASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 46
Y S V+ A+ H+K QI Q++ ++ + P++ LH ++ + + +Q
Sbjct: 830 YGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 883
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 87.4 bits (207), Expect = 1e-17
Identities = 35/114 (30%), Positives = 67/114 (58%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMT 208
++YLG+ D ++TF+ HI + I+ LYP+I R+SK+S+ NK+ ++KT P++
Sbjct: 718 IRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILM 777
Query: 207 YASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 46
Y S V+ A+ H+K QI Q++ ++ + P++ LH ++ + + +Q
Sbjct: 778 YGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 831
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/111 (35%), Positives = 68/111 (61%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
+V YLGV LD R+T+R HI+ + + L+ +I S +SL +KV LY + ++P+
Sbjct: 737 EVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIW 796
Query: 210 TYASVVFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 58
TY S ++ +A+ ++ Q QS+ R GAPW+VR+ ++ DL++ S++
Sbjct: 797 TYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVT 847
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K +YLG+ LD R+TF H+ ++ + +L +I + S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA ++ + K Q +++++ R + A + R D+ +++S + AS
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 33 RHFDKAARHEN 1
R+ + HEN
Sbjct: 927 RYANSLTDHEN 937
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K +YLG+ LD R+TF H+ ++ + +L +I + S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA ++ + K Q +++++ R + A + R D+ +++S + AS
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 33 RHFDKAARHEN 1
R+ + HEN
Sbjct: 927 RYANSLTDHEN 937
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K +YLG+ LD R+TF H+ ++ + +L +I + S + K+ L+K + P+
Sbjct: 807 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 866
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA ++ + K Q +++++ R + A + R D+ +++S + AS
Sbjct: 867 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQ 926
Query: 33 RHFDKAARHEN 1
R+ + HEN
Sbjct: 927 RYANSLTDHEN 937
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 63.7 bits (148), Expect = 2e-10
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K +YLG+ LD R+TF H+ ++ + +L +I + S + K+ L+K + P+
Sbjct: 360 KQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIW 419
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA ++ + K Q +++++ R + A + R D+ +++S + AS
Sbjct: 420 HYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQ 479
Query: 33 RHFDKAARHEN 1
R+ + HEN
Sbjct: 480 RYANSLTDHEN 490
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/131 (24%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K YLGVTLDS++T H+ + + + +L ++ RSK+ + K+ + K+ + P+
Sbjct: 808 KQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIW 867
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA + ++ Q+ ++R R A + RN + D ++++ ++ Q A
Sbjct: 868 QYAIAAWGPLVTDAQIRRVQVEENRKIRDICRAGRYTRNQTIRDLFGVKTVEEFYQQAMH 927
Query: 33 RHFDKAARHEN 1
R + H N
Sbjct: 928 RFSETIKSHPN 938
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 55.2 bits (127), Expect = 6e-08
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K YLGV LDS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+
Sbjct: 680 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 739
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA + ++ Q+ ++R R A + +N + D ++++ ++ Q A
Sbjct: 740 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVH 799
Query: 33 RHFDKAARHEN 1
R + H N
Sbjct: 800 RFSETTKSHPN 810
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 55.2 bits (127), Expect = 6e-08
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K YLGV LDS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 855
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA + ++ Q+ ++R R A + +N + D ++++ ++ Q A
Sbjct: 856 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVH 915
Query: 33 RHFDKAARHEN 1
R + H N
Sbjct: 916 RFSETTKSHPN 926
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 55.2 bits (127), Expect = 6e-08
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K YLGV LDS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 855
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA + ++ Q+ ++R R A + +N + D ++++ ++ Q A
Sbjct: 856 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVH 915
Query: 33 RHFDKAARHEN 1
R + H N
Sbjct: 916 RFSETTKSHPN 926
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 55.2 bits (127), Expect = 6e-08
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K YLGV LDS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+
Sbjct: 758 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 817
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA + ++ Q+ ++R R A + +N + D ++++ ++ Q A
Sbjct: 818 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVH 877
Query: 33 RHFDKAARHEN 1
R + H N
Sbjct: 878 RFSETTKSHPN 888
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 55.2 bits (127), Expect = 6e-08
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K YLGV LDS++T PH+ V + ++ ++ RSK+ K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKMLILKSVLSPIW 855
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA + ++ Q+ ++R R A + +N + D ++++ ++ Q A
Sbjct: 856 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTKNQTIRDRYCVKTVEEFYQQAVH 915
Query: 33 RHFDKAARHEN 1
R + H N
Sbjct: 916 RFSETTKSHPN 926
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 54.4 bits (125), Expect = 1e-07
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K YLGV LDS++T H+ + + ++ ++ RRSK+ + K+ + K+ + P+
Sbjct: 11 KQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIW 70
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA + ++ Q+ ++R R A + N + D ++++ ++ Q A
Sbjct: 71 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALH 130
Query: 33 RHFDKAARHEN 1
R + H N
Sbjct: 131 RFSETIKSHPN 141
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 54.4 bits (125), Expect = 1e-07
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Frame = -2
Query: 390 KVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVM 211
K YLGV LDS++T H+ + + ++ ++ RRSK+ + K+ + K+ + P+
Sbjct: 796 KQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIW 855
Query: 210 TYASVVFAH-AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASM 34
YA + ++ Q+ ++R R A + N + D ++++ ++ Q A
Sbjct: 856 QYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALH 915
Query: 33 RHFDKAARHEN 1
R + H N
Sbjct: 916 RFSETIKSHPN 926
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 36.3 bits (80), Expect = 0.030
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = -2
Query: 384 KYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTY 205
+YLG+T+ M F HI ++R R ++G L ++ S R + T+Y + P + +
Sbjct: 735 RYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLF 794
Query: 204 ASVVFAHAA 178
+ V+ A
Sbjct: 795 GAPVWYDTA 803
>AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p
protein.
Length = 543
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 214 DGAYASFVECHLISKG-HFTSPTYHRVET 297
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA
protein.
Length = 543
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 214 DGAYASFVECHLISKG-HFTSPTYHRVET 297
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = -2
Query: 387 VKYLGVTLDSRMTFRPHIKTVRDRAAF---ILGRLYPMI 280
+KYLGV +D R++F+ H + +AA L R+ P +
Sbjct: 717 LKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,844,986
Number of Sequences: 53049
Number of extensions: 555598
Number of successful extensions: 1148
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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