Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1201
(617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens ... 32 1.4
L42324-1|AAB65819.1| 331|Homo sapiens G protein-linked receptor... 31 4.3
BT009907-1|AAP88909.1| 331|Homo sapiens G protein-coupled recep... 30 5.7
BC066927-1|AAH66927.1| 331|Homo sapiens GPR18 protein protein. 30 5.7
BC050646-1|AAH50646.1| 331|Homo sapiens G protein-coupled recep... 30 5.7
BC008569-1|AAH08569.1| 331|Homo sapiens GPR18 protein protein. 30 5.7
AL160155-7|CAI14307.1| 98|Homo sapiens G protein-coupled recep... 30 5.7
AL160155-6|CAI14306.1| 331|Homo sapiens G protein-coupled recep... 30 5.7
AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens ... 30 5.7
BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11 pr... 29 9.9
AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein. 29 9.9
AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens ... 29 9.9
>AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ46559 fis, clone THYMU3040126. ).
Length = 303
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Frame = -1
Query: 254 CSC---NIYTTIYVF---YVYLVTICFFLLFLFT---NWILMLAFAHILIYLLRCTMTEV 102
C C +IYT IYV+ Y+Y T + ++ T + + HI I++ C T +
Sbjct: 6 CMCVYVHIYTCIYVYTHTYIYTYTCMYVCIYSHTYIHTHVYVCVHIHICIHMYMCVYTHI 65
Query: 101 Y 99
Y
Sbjct: 66 Y 66
>L42324-1|AAB65819.1| 331|Homo sapiens G protein-linked receptor
protein.
Length = 331
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 310 TLKQYTCKYLLITNIIKISVLVIFILRFMSFMYI**RFVFSYYFCLLIG 164
T K+ T + + N+ + ++ I L F F Y + F YFC +IG
Sbjct: 50 TTKKRTTVTIYMMNVALVDLIFIMTLPFRMFYYAKDAWPFGEYFCQIIG 98
>BT009907-1|AAP88909.1| 331|Homo sapiens G protein-coupled receptor
18 protein.
Length = 331
Score = 30.3 bits (65), Expect = 5.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 310 TLKQYTCKYLLITNIIKISVLVIFILRFMSFMYI**RFVFSYYFCLLIG 164
T K+ T + + N+ + ++ I L F F Y + F YFC ++G
Sbjct: 50 TTKKRTTVTIYMMNVALVDLIFIMTLPFRMFYYAKDEWPFGEYFCQILG 98
>BC066927-1|AAH66927.1| 331|Homo sapiens GPR18 protein protein.
Length = 331
Score = 30.3 bits (65), Expect = 5.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 310 TLKQYTCKYLLITNIIKISVLVIFILRFMSFMYI**RFVFSYYFCLLIG 164
T K+ T + + N+ + ++ I L F F Y + F YFC ++G
Sbjct: 50 TTKKRTTVTIYMMNVALVDLIFIMTLPFRMFYYAKDEWPFGEYFCQILG 98
>BC050646-1|AAH50646.1| 331|Homo sapiens G protein-coupled receptor
18 protein.
Length = 331
Score = 30.3 bits (65), Expect = 5.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 310 TLKQYTCKYLLITNIIKISVLVIFILRFMSFMYI**RFVFSYYFCLLIG 164
T K+ T + + N+ + ++ I L F F Y + F YFC ++G
Sbjct: 50 TTKKRTTVTIYMMNVALVDLIFIMTLPFRMFYYAKDEWPFGEYFCQILG 98
>BC008569-1|AAH08569.1| 331|Homo sapiens GPR18 protein protein.
Length = 331
Score = 30.3 bits (65), Expect = 5.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 310 TLKQYTCKYLLITNIIKISVLVIFILRFMSFMYI**RFVFSYYFCLLIG 164
T K+ T + + N+ + ++ I L F F Y + F YFC ++G
Sbjct: 50 TTKKRTTVTIYMMNVALVDLIFIMTLPFRMFYYAKDEWPFGEYFCQILG 98
>AL160155-7|CAI14307.1| 98|Homo sapiens G protein-coupled receptor
18 protein.
Length = 98
Score = 30.3 bits (65), Expect = 5.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 310 TLKQYTCKYLLITNIIKISVLVIFILRFMSFMYI**RFVFSYYFCLLIG 164
T K+ T + + N+ + ++ I L F F Y + F YFC ++G
Sbjct: 50 TTKKRTTVTIYMMNVALVDLIFIMTLPFRMFYYAKDEWPFGEYFCQILG 98
>AL160155-6|CAI14306.1| 331|Homo sapiens G protein-coupled receptor
18 protein.
Length = 331
Score = 30.3 bits (65), Expect = 5.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -2
Query: 310 TLKQYTCKYLLITNIIKISVLVIFILRFMSFMYI**RFVFSYYFCLLIG 164
T K+ T + + N+ + ++ I L F F Y + F YFC ++G
Sbjct: 50 TTKKRTTVTIYMMNVALVDLIFIMTLPFRMFYYAKDEWPFGEYFCQILG 98
>AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45488 fis, clone BRTHA2003759. ).
Length = 130
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Frame = -1
Query: 242 IYTTIYVFYVYLVTICFFL-----LFLFTN---WILMLAFAHILIYLLRCTMTEVYEF 93
I+T IY++ + IC ++ L++FT ++ + + HI IY+ C +Y F
Sbjct: 41 IFTYIYLYIFIYIYICLYIYLYIYLYIFTYIYIYLHIFIYLHIFIYICICLYIFIYVF 98
>BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11
protein.
Length = 719
Score = 29.5 bits (63), Expect = 9.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 109 VIVHRNKYIKIWANANINIQLV 174
V+VH NK ++IW N ++N+ V
Sbjct: 79 VVVHDNKVLRIWNNEDVNLDKV 100
>AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein.
Length = 719
Score = 29.5 bits (63), Expect = 9.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 109 VIVHRNKYIKIWANANINIQLV 174
V+VH NK ++IW N ++N+ V
Sbjct: 79 VVVHDNKVLRIWNNEDVNLDKV 100
>AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ13640 fis, clone PLACE1011221. ).
Length = 719
Score = 29.5 bits (63), Expect = 9.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 109 VIVHRNKYIKIWANANINIQLV 174
V+VH NK ++IW N ++N+ V
Sbjct: 79 VVVHDNKVLRIWNNEDVNLDKV 100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,713,636
Number of Sequences: 237096
Number of extensions: 1290573
Number of successful extensions: 9856
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9852
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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