Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1201
         (617 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p pro...    29   6.6  
AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubuli...    29   6.6  
AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA...    29   6.6  
BT016027-1|AAV36912.1|  897|Drosophila melanogaster RE07945p pro...    28   8.8  
AE014297-2836|ABI31184.1|  897|Drosophila melanogaster CG31201-P...    28   8.8  

>AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p
           protein.
          Length = 1351

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = -1

Query: 149 FAHILIYLLRCTMTEVYEF*RTQN*IFNLKLSKALN-LFICRAMH 18
           F H+LIY LRC ++  Y F + Q  I++ +L +++N +FI R ++
Sbjct: 421 FLHLLIYFLRC-ISRNY-FIQLQRWIYHGELDESVNEIFISRCLN 463


>AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubulin
           ring protein protein.
          Length = 1351

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = -1

Query: 149 FAHILIYLLRCTMTEVYEF*RTQN*IFNLKLSKALN-LFICRAMH 18
           F H+LIY LRC ++  Y F + Q  I++ +L +++N +FI R ++
Sbjct: 421 FLHLLIYFLRC-ISRNY-FIQLQRWIYHGELDESVNEIFISRCLN 463


>AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA
           protein.
          Length = 1351

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = -1

Query: 149 FAHILIYLLRCTMTEVYEF*RTQN*IFNLKLSKALN-LFICRAMH 18
           F H+LIY LRC ++  Y F + Q  I++ +L +++N +FI R ++
Sbjct: 421 FLHLLIYFLRC-ISRNY-FIQLQRWIYHGELDESVNEIFISRCLN 463


>BT016027-1|AAV36912.1|  897|Drosophila melanogaster RE07945p
           protein.
          Length = 897

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 224 VFYVYLVTICFFLLFLFTNWIL-MLAFAHILIYLLRCTMTEVYEF 93
           VF+V LV  C  LL+   +W+L ++  AH     LR  + E ++F
Sbjct: 817 VFFVLLVGSCCALLYGIISWVLFVMKKAHHYRVPLRDALKEEFQF 861


>AE014297-2836|ABI31184.1|  897|Drosophila melanogaster CG31201-PB
           protein.
          Length = 897

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -1

Query: 224 VFYVYLVTICFFLLFLFTNWIL-MLAFAHILIYLLRCTMTEVYEF 93
           VF+V LV  C  LL+   +W+L ++  AH     LR  + E ++F
Sbjct: 817 VFFVLLVGSCCALLYGIISWVLFVMKKAHHYRVPLRDALKEEFQF 861


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,268,737
Number of Sequences: 53049
Number of extensions: 397989
Number of successful extensions: 821
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)