Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1200
         (326 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   3.9  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    22   5.1  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            21   8.9  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 156 RELMRLAVLLAAVTASIGAPASS 224
           +++M+    LAA T +IG P SS
Sbjct: 788 KKVMKAINALAAFTPNIGGPCSS 810


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 156 RELMRLAVLLAAVTASIGAPASSANYD 236
           R  + LA+L A     +GAPA+   YD
Sbjct: 5   RAWLLLALLGAQCALILGAPATGHGYD 31


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +3

Query: 195 TASIGAPASSANYDENLTLDRKEQSTHE 278
           T+SI +     N   NLT     +  HE
Sbjct: 97  TSSIASSGDDTNSSNNLTTSNGTEDRHE 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,594
Number of Sequences: 2352
Number of extensions: 2802
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22477884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)