Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1196
         (491 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052013-1|AAK93437.1|  926|Drosophila melanogaster LD47309p pro...    37   0.017
AE013599-3135|AAM70854.1|  926|Drosophila melanogaster CG4050-PB...    37   0.017
AE013599-3134|AAF46676.2|  926|Drosophila melanogaster CG4050-PA...    37   0.017
BT023291-1|AAY55707.1|   89|Drosophila melanogaster IP10626p pro...    28   6.0  
BT023215-1|AAY55631.1|   89|Drosophila melanogaster IP10726p pro...    28   6.0  

>AY052013-1|AAK93437.1|  926|Drosophila melanogaster LD47309p
           protein.
          Length = 926

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +3

Query: 72  CCDWTMGTVALVKSWRDPRN 131
           CCDWTMGTV L++ + D RN
Sbjct: 366 CCDWTMGTVPLLQGFTDSRN 385


>AE013599-3135|AAM70854.1|  926|Drosophila melanogaster CG4050-PB,
           isoform B protein.
          Length = 926

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +3

Query: 72  CCDWTMGTVALVKSWRDPRN 131
           CCDWTMGTV L++ + D RN
Sbjct: 366 CCDWTMGTVPLLQGFTDSRN 385


>AE013599-3134|AAF46676.2|  926|Drosophila melanogaster CG4050-PA,
           isoform A protein.
          Length = 926

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +3

Query: 72  CCDWTMGTVALVKSWRDPRN 131
           CCDWTMGTV L++ + D RN
Sbjct: 366 CCDWTMGTVPLLQGFTDSRN 385


>BT023291-1|AAY55707.1|   89|Drosophila melanogaster IP10626p
           protein.
          Length = 89

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = +2

Query: 11  LDLRLFTGVECLALGITRSLMLRLDHGHRSSGQIVARSSERRHVGVSCSSRCR 169
           L L    G+  L L      +  L+HGH  +G +  R S+     + C   CR
Sbjct: 25  LVLHGLVGLHALILQPMEQHLFALEHGHSCAGCLCCRLSQSTFGHIGCLFACR 77


>BT023215-1|AAY55631.1|   89|Drosophila melanogaster IP10726p
           protein.
          Length = 89

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = +2

Query: 11  LDLRLFTGVECLALGITRSLMLRLDHGHRSSGQIVARSSERRHVGVSCSSRCR 169
           L L    G+  L L      +  L+HGH  +G +  R S+     + C   CR
Sbjct: 25  LVLHGLVGLHALILQPMEQHLFALEHGHSCAGCLCCRLSQSTFGHIGCLFACR 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,106,900
Number of Sequences: 53049
Number of extensions: 487433
Number of successful extensions: 1030
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)