Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1195
(693 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0102 + 11275656-11275866,11276648-11276811,11276832-112769... 31 0.87
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 31 1.1
04_03_0135 + 11686724-11687209 30 1.5
10_02_0007 - 4100613-4100993,4101026-4101074,4102966-4103393 30 2.0
11_04_0034 + 12602323-12602521,12602694-12603202 29 2.6
08_02_0118 + 12772636-12772910,12773151-12773254,12774097-127744... 29 2.6
06_03_1460 - 30312640-30313116,30313457-30313708,30313808-303139... 29 2.6
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230 29 2.6
09_02_0081 - 4041364-4041555,4041830-4041911,4042192-4042443,404... 29 3.5
07_03_0970 - 23034521-23034928,23036173-23037081 29 3.5
01_05_0044 + 17531005-17531739,17532624-17532956,17532968-17533027 29 3.5
01_05_0014 - 17162664-17163500 29 3.5
02_03_0059 + 14539028-14539100,14539488-14539834 29 4.6
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 29 4.6
07_03_1461 - 26700613-26700621,26700784-26700851,26701778-267019... 28 6.1
06_01_0609 + 4404287-4405023,4405496-4405631,4405724-4405876,440... 28 6.1
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 28 6.1
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 28 6.1
02_03_0006 - 13868590-13869593,13869887-13870156,13870487-13871090 28 6.1
11_04_0043 + 12703579-12703648,12704412-12704484,12705604-127058... 28 8.1
10_05_0008 + 7791462-7791611,7792378-7792833 28 8.1
06_03_1208 - 28422941-28423139,28423854-28424434,28424705-284250... 28 8.1
06_02_0035 + 10816723-10819497,10819964-10820011 28 8.1
04_01_0503 + 6594896-6595804 28 8.1
03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085 28 8.1
03_05_0310 + 23008915-23009841,23010401-23011162 28 8.1
02_05_0686 - 30900748-30902167,30903442-30904742 28 8.1
>04_03_0102 +
11275656-11275866,11276648-11276811,11276832-11276999,
11277361-11277414
Length = 198
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 365 PGQDPRRPSXGPAQGQARP---SPSEGPGERQQTEPVRRQRHVREHPVV 502
P + R P G +G RP S EG E + P++ +RH+ P+V
Sbjct: 123 PQKGVRTPGGGYGKGLLRPLMASEKEGAAESRSPPPMKVKRHLMPRPIV 171
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +2
Query: 332 GERR*TSEAGGPGQDPRRPSXGPAQGQARP---SPSEGPGERQQTEPVRRQRHVREHPV 499
G R S A G PRR PA P SP + ++ PVRR R PV
Sbjct: 15 GRSRSRSPARDRGSPPRRRERSPAARSRSPRRRSPVKSTSSHRERSPVRRNGSPRRSPV 73
>04_03_0135 + 11686724-11687209
Length = 161
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 371 QDPRRPSXGPAQGQARP---SPSEGPGERQQTEPVRRQRHVREHPVVALRTCLRLRSVKC 541
Q R P G + RP S EG E + P++ +RH++ P+V + + VK
Sbjct: 35 QGVRTPGSGYGKSLLRPLMASEKEGAAESRSPPPMKVKRHLKPPPIVRAPSQFQEEEVKS 94
Query: 542 SE 547
E
Sbjct: 95 PE 96
>10_02_0007 - 4100613-4100993,4101026-4101074,4102966-4103393
Length = 285
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +2
Query: 371 QDPRRPSXGPAQGQARPSPS---EGPGERQQTEPVRRQRHVREHPVVALRTCLRLRSVKC 541
Q R PS G +G RP + EG E P++ +RH+ P+V + VK
Sbjct: 159 QGVRTPSGGYGKGLLRPLTALEKEGTAESHSPPPMKVKRHLTHPPIVRAAGQFQGDEVKS 218
Query: 542 SECNTRMSFHPLKEL 586
E + +K+L
Sbjct: 219 PEPSVHKLASQVKKL 233
>11_04_0034 + 12602323-12602521,12602694-12603202
Length = 235
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 371 QDPRRPSXGPAQGQARP---SPSEGPGERQQTEPVRRQRHVREHPVV 502
Q R P G +G RP S EG E + P++ +RH+ P+V
Sbjct: 109 QGVRTPGGGYGKGLLRPLTVSKKEGAAESRIPPPIKVKRHLTPPPIV 155
>08_02_0118 +
12772636-12772910,12773151-12773254,12774097-12774487,
12774795-12774870,12775030-12775047
Length = 287
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 371 QDPRRPSXGPAQGQARP--SPSEGPGERQQTEPVRRQRHVREHPVV 502
Q R P G +G RP + EG E + P++ +RH+ P+V
Sbjct: 152 QGVRTPGGGYGKGLLRPLTASEEGAAESRSPPPMKVKRHLMPPPIV 197
>06_03_1460 -
30312640-30313116,30313457-30313708,30313808-30313938,
30314037-30314322
Length = 381
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = -2
Query: 509 VEQLQGVP*HDAVVVQAQSVGALPALLKGSVAPGLAQGHXKVAGGLDPARRLH*FNAAHR 330
+ +L G+ ++ VG +P++ + G G ++A G D A R H A R
Sbjct: 222 ITELYGMGARKFGIINVGPVGCVPSVRVANATGGCNDGMNQLAAGFDAALRGHMSGLAAR 281
Query: 329 AEDVAY 312
+AY
Sbjct: 282 LPGLAY 287
>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
Length = 171
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 93 NDVLKESQKKTVTFNKNHNRYSNFDNEVSDPNDKENVANGYSGD 224
N +L +S+ +TV NK+ + ++E D D EN + +GD
Sbjct: 50 NRILSKSKTETVPENKDDGESDDDNDEEGDDEDAENQGDDDAGD 93
>09_02_0081 -
4041364-4041555,4041830-4041911,4042192-4042443,
4042529-4044001,4044222-4044733,4044824-4045021
Length = 902
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 353 EAGGPGQDPRRPSXGPAQGQARPSPSEGPGERQQTEPVRR 472
E P PR+P+ P+ Q P P+ P + T P ++
Sbjct: 501 EPPSPRHPPRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQ 540
>07_03_0970 - 23034521-23034928,23036173-23037081
Length = 438
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 347 TSEAGGPGQDPRRPSXGPAQGQ-ARPSPSEGPGERQQTEP 463
TS A G DP P+ PAQ A P+P+ + P
Sbjct: 54 TSSASAAGSDPSNPNADPAQSSAANPNPNSSSSAAAASVP 93
>01_05_0044 + 17531005-17531739,17532624-17532956,17532968-17533027
Length = 375
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +2
Query: 371 QDPRRPSXGPAQGQARP---SPSEGPGERQQTEPVRRQRHVREHPVVALRTCLRLRSVKC 541
Q + P G +G RP S EG E + P++ +RH+ P+V + VK
Sbjct: 252 QGVQTPGGGYGKGLLRPLIASEKEGAAESRSPPPMKVKRHLTPPPIVRTPGQYQEDEVKS 311
Query: 542 SECNTRMSFHPLKELVFLS-EVRDH 613
E + +K+L + E RDH
Sbjct: 312 PEPSIHKLAAQVKKLRKENIEFRDH 336
>01_05_0014 - 17162664-17163500
Length = 278
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 380 RRPSXGPAQGQARP---SPSEGPGERQQTEPVRRQRHVREHPVVALRTCLRLRSVKCSEC 550
R S G +G RP S EG E + P++ +RH+ P+V + + VK E
Sbjct: 155 RTTSGGYGKGLLRPLMASEKEGAAESRSPPPMKVKRHLTPPPIVRTPSQFQEDEVKSPEP 214
Query: 551 NTRMSFHPLKEL 586
+ + +K+L
Sbjct: 215 SVQKLAAQVKKL 226
>02_03_0059 + 14539028-14539100,14539488-14539834
Length = 139
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 380 RRPSXGPAQGQARP---SPSEGPGERQQTEPVRRQRHVREHPVVALRTCLRLRSVKCSE 547
R PS G +G RP + EG E + P++ +RH+ P+V + + +K E
Sbjct: 61 RTPSGGYGKGLLRPLTATEKEGAAESRIPPPMKVKRHLTPPPIVRAADQFQEQEMKSPE 119
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 374 DPRRPSXGPAQGQARPSPSEGP 439
DP P PA+G+A P P++ P
Sbjct: 77 DPAAPPPPPAEGEAAPPPADAP 98
>07_03_1461 -
26700613-26700621,26700784-26700851,26701778-26701919,
26702011-26702318,26702415-26702481,26702543-26702664,
26702763-26702815,26702924-26703006,26703092-26703160,
26703235-26703633
Length = 439
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +2
Query: 341 R*TSEAGGPGQ-DPR---RPSXGPAQGQARPSPSEGPGERQQTEPVRRQRHVREHPVVAL 508
R ++ GPG+ PR PAQG+++P PS+ VR + + ++ + L
Sbjct: 333 RPSNPESGPGRPQPRTKQHQDASPAQGRSQPMPSDKSASHHDENSVRAKLELAKNAKLEL 392
Query: 509 RTCLRLRSVK 538
+L K
Sbjct: 393 TNSAKLEVTK 402
>06_01_0609 +
4404287-4405023,4405496-4405631,4405724-4405876,
4405985-4406128,4406224-4406375,4406453-4406552,
4406653-4406775,4406876-4407037,4407190-4407247,
4407324-4407502,4408294-4408402,4408567-4408637,
4408891-4408986,4409727-4409803,4410983-4411066,
4411473-4411607,4411744-4411819,4413072-4413167,
4413580-4413671,4413745-4413868,4413966-4414052
Length = 996
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 371 QDPRRPSXGPAQGQARPSPSEGPGERQQTEPVRRQRHVRE 490
+ P +P+ P + +A PSPS P Q+EP R+++ R+
Sbjct: 77 ETPVKPTPTPKRKRAAPSPS--PKTPTQSEPKRQRQRQRQ 114
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 138 KNHNRYSNFDNEVSDPNDKENVANGYSGD 224
+N NR NF+++ N++ +A+G+S D
Sbjct: 341 ENQNRNHNFNSDSPTTNNRHEIASGFSTD 369
>04_04_0076 +
22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 6 SEDEQLLLLSENGGSRITMQTVSKDPKYQNDVLKESQKKTVTFNKNHNRYSN 161
+E E+ L N G + +Q +SKD K N++L K +K H S+
Sbjct: 262 TESEKNDLKLRNEGYTLEVQKLSKDNKELNELLSGFTVKVTELDKEHTSISS 313
>02_03_0006 - 13868590-13869593,13869887-13870156,13870487-13871090
Length = 625
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 371 QDPRRPSXGPAQGQARP---SPSEGPGERQQTEPVRRQRHVREHPVVALRTCLRLRSVKC 541
Q R P G +G P S EG E + P++ +RH+ P+V + VK
Sbjct: 499 QGVRTPGGGYGKGLLWPLTASEKEGAAESRSPPPMKVKRHLTPPPIVRAAGQCQEDEVKL 558
Query: 542 SE 547
SE
Sbjct: 559 SE 560
>11_04_0043 +
12703579-12703648,12704412-12704484,12705604-12705834,
12705874-12706540
Length = 346
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 50 EDHDADGQQGPQVPERRAEGEPKENGD 130
+D D DG +G P R E P++NG+
Sbjct: 250 DDDDDDGMEGHISPVREDEPHPQDNGE 276
>10_05_0008 + 7791462-7791611,7792378-7792833
Length = 201
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
Frame = +2
Query: 371 QDPRRPSXGPAQGQARP---SPSEGPGERQQTEPVRRQRHVREHPVVALRTCLRLRSVKC 541
Q + P G +G RP S EG + + P++ +RH+ P+V + VK
Sbjct: 93 QGVQTPGGGYGKGLLRPLTASGKEGAAGSRSSPPMKVKRHLTPPPIVRAADQFQEEEVKS 152
Query: 542 SECNTRMSFHPLKEL 586
E + +K+L
Sbjct: 153 PEPSVHKLASQVKKL 167
>06_03_1208 -
28422941-28423139,28423854-28424434,28424705-28425078,
28425235-28425339,28425902-28425970,28426084-28426156,
28426395-28426478,28426616-28426648,28426731-28426790,
28427535-28427627,28427851-28427970,28428804-28428886,
28428887-28429007,28429114-28429164,28429245-28429333,
28429429-28429561,28430220-28430354,28430581-28430952,
28431679-28431796,28431883-28431998,28432131-28432442
Length = 1106
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +2
Query: 350 SEAGGPGQDPRRPSXGPAQGQARPSPSEGPGERQQTEPVRRQR 478
S +GG G P + P Q + R P R ++ P + R
Sbjct: 4 SSSGGRGAPPPATAASPGQKRPRGDDPASPSNRSESAPAKNPR 46
>06_02_0035 + 10816723-10819497,10819964-10820011
Length = 940
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +2
Query: 368 GQDPRRPSXGPAQGQARPSPSEGPGERQQTEPVRRQRHVREHPVVALRTCLRL 526
G DP P GP QG+ PS G R+ P + R PV R+ + L
Sbjct: 395 GPDPVMP--GPCQGEQPTEPSIATGSRR--NPASKNREDSTDPVERARSLILL 443
>04_01_0503 + 6594896-6595804
Length = 302
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 374 DPRRPSXGPAQGQARPSPSEGPGE 445
D + PS GP+ ++PS EG GE
Sbjct: 267 DAQPPSPGPSASSSKPSIGEGQGE 290
>03_05_0864 - 28362146-28362500,28362585-28362629,28362727-28363085
Length = 252
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 371 QDPRRPSXGPAQGQARPSPSEGPGERQQTEPVRRQR 478
Q PR PS P Q P+P+ + Q +P R R
Sbjct: 26 QSPRPPSAQPPPEQQPPTPTPTQQQSMQAQPQARPR 61
>03_05_0310 + 23008915-23009841,23010401-23011162
Length = 562
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 371 QDPRRPSXGPAQGQARP---SPSEGPGERQQTEPVRRQRHVREHPVV 502
Q R P G +G RP S EG E + P++ + H+ P+V
Sbjct: 436 QGVRTPGGGYGKGLLRPLMASEKEGAAESRSPPPIKVKLHLTPPPIV 482
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +2
Query: 323 LQHGERR*TSEAGGPGQDPRRPSXGPAQGQARPSPSEGPGERQQTEPVRRQR 478
L+HG++R +EAGG GQ G AQG A G+R + EP R R
Sbjct: 102 LRHGKKRELTEAGGAGQ-----HYGGAQGGAL------TGKRPEREPKRPAR 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,389,972
Number of Sequences: 37544
Number of extensions: 228403
Number of successful extensions: 1199
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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