Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1189
(619 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72942-1|CAA51447.1| 335|Caenorhabditis elegans Wnt-1 protein. 58 7e-09
X72941-1|CAA51446.1| 372|Caenorhabditis elegans Wnt-1 protein p... 58 7e-09
AF025463-6|AAO38623.1| 332|Caenorhabditis elegans C. elegans wn... 58 7e-09
AF025463-5|AAB71011.1| 372|Caenorhabditis elegans C. elegans wn... 58 7e-09
Z68301-1|CAA92624.1| 360|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z70271-1|CAB61041.1| 393|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AF103732-1|AAD03603.1| 393|Caenorhabditis elegans Wnt homolog p... 52 2e-07
X72943-1|CAA51448.1| 360|Caenorhabditis elegans Wnt-2 protein p... 52 4e-07
U41996-3|AAA83472.2| 362|Caenorhabditis elegans More of ms prot... 50 2e-06
AF013952-1|AAC47749.1| 362|Caenorhabditis elegans mom-2 protein. 50 2e-06
U22184-1|AAA64847.1| 348|Caenorhabditis elegans Wnt protein pro... 44 1e-04
U22179-1|AAA64846.1| 348|Caenorhabditis elegans Wnt protein pro... 44 1e-04
AC006627-2|AAT68899.1| 169|Caenorhabditis elegans Abnormal cell... 44 1e-04
AC006627-1|AAK85460.1| 348|Caenorhabditis elegans Abnormal cell... 44 1e-04
Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical... 29 2.0
>X72942-1|CAA51447.1| 335|Caenorhabditis elegans Wnt-1 protein.
Length = 335
Score = 57.6 bits (133), Expect = 7e-09
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = -1
Query: 115 QHVQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
Q ++ +++ECKCHGMSGSC ++TCW LP+FR +G
Sbjct: 215 QVLEKSLRRECKCHGMSGSCEMRTCWDSLPNFRHIG 250
>X72941-1|CAA51446.1| 372|Caenorhabditis elegans Wnt-1 protein
protein.
Length = 372
Score = 57.6 bits (133), Expect = 7e-09
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = -1
Query: 115 QHVQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
Q ++ +++ECKCHGMSGSC ++TCW LP+FR +G
Sbjct: 215 QVLEKSLRRECKCHGMSGSCEMRTCWDSLPNFRHIG 250
>AF025463-6|AAO38623.1| 332|Caenorhabditis elegans C. elegans wnt
family protein 1,isoform b protein.
Length = 332
Score = 57.6 bits (133), Expect = 7e-09
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = -1
Query: 115 QHVQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
Q ++ +++ECKCHGMSGSC ++TCW LP+FR +G
Sbjct: 215 QVLEKSLRRECKCHGMSGSCEMRTCWDSLPNFRHIG 250
>AF025463-5|AAB71011.1| 372|Caenorhabditis elegans C. elegans wnt
family protein 1,isoform a protein.
Length = 372
Score = 57.6 bits (133), Expect = 7e-09
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = -1
Query: 115 QHVQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
Q ++ +++ECKCHGMSGSC ++TCW LP+FR +G
Sbjct: 215 QVLEKSLRRECKCHGMSGSCEMRTCWDSLPNFRHIG 250
>Z68301-1|CAA92624.1| 360|Caenorhabditis elegans Hypothetical
protein W01B6.1 protein.
Length = 360
Score = 54.4 bits (125), Expect = 6e-08
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -1
Query: 94 KQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
K +CKCHG+SG+C +KTCWM+LPS VG
Sbjct: 210 KPKCKCHGVSGACNMKTCWMQLPSMEQVG 238
>Z70271-1|CAB61041.1| 393|Caenorhabditis elegans Hypothetical
protein W08D2.1 protein.
Length = 393
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = -1
Query: 211 SKEFKDIWTSL*TPVNDRIN*LLPYAEDVVLLQHVQTEMKQECKCHGMSGSCTVKTCWMR 32
+K+F D W + + L+ + V + + ++++C+CHG+SGSC KTCW++
Sbjct: 206 AKKFLDDWETAQFDKTKNVAHLVRRHNNFVGREAIAQNIRRQCRCHGVSGSCEFKTCWLQ 265
Query: 31 LPSFRSVGD 5
+ F V D
Sbjct: 266 MQKFSQVSD 274
>AF103732-1|AAD03603.1| 393|Caenorhabditis elegans Wnt homolog
protein.
Length = 393
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = -1
Query: 211 SKEFKDIWTSL*TPVNDRIN*LLPYAEDVVLLQHVQTEMKQECKCHGMSGSCTVKTCWMR 32
+K+F D W + + L+ + V + + ++++C+CHG+SGSC KTCW++
Sbjct: 206 AKKFLDDWETAQFDKTKNVAHLVRRHNNFVGREAIAQNIRRQCRCHGVSGSCEFKTCWLQ 265
Query: 31 LPSFRSVGD 5
+ F V D
Sbjct: 266 MQKFSQVSD 274
>X72943-1|CAA51448.1| 360|Caenorhabditis elegans Wnt-2 protein
protein.
Length = 360
Score = 51.6 bits (118), Expect = 4e-07
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -1
Query: 94 KQECKCHGMSGSCTVKTCWMRLPSFRSVG 8
K +CKCHG+SG C +KTCW+ LPS VG
Sbjct: 210 KPKCKCHGVSGRCNMKTCWIELPSMEQVG 238
>U41996-3|AAA83472.2| 362|Caenorhabditis elegans More of ms protein
2 protein.
Length = 362
Score = 49.6 bits (113), Expect = 2e-06
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1
Query: 97 MKQECKCHGMSGSCTVKTCWMRLPSF 20
M +ECKCHG+SGSC KTCW +P F
Sbjct: 213 MNKECKCHGVSGSCVTKTCWKVMPKF 238
>AF013952-1|AAC47749.1| 362|Caenorhabditis elegans mom-2 protein.
Length = 362
Score = 49.6 bits (113), Expect = 2e-06
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1
Query: 97 MKQECKCHGMSGSCTVKTCWMRLPSF 20
M +ECKCHG+SGSC KTCW +P F
Sbjct: 213 MNKECKCHGVSGSCVTKTCWKVMPKF 238
>U22184-1|AAA64847.1| 348|Caenorhabditis elegans Wnt protein
protein.
Length = 348
Score = 43.6 bits (98), Expect = 1e-04
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
++ + CKCHG+SGSC KTCW R + + D
Sbjct: 205 IKKTLISSCKCHGVSGSCQQKTCWKRTATLEHITD 239
>U22179-1|AAA64846.1| 348|Caenorhabditis elegans Wnt protein
protein.
Length = 348
Score = 43.6 bits (98), Expect = 1e-04
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
++ + CKCHG+SGSC KTCW R + + D
Sbjct: 205 IKKTLISSCKCHGVSGSCQQKTCWKRTATLEHITD 239
>AC006627-2|AAT68899.1| 169|Caenorhabditis elegans Abnormal cell
lineage protein 44,isoform b protein.
Length = 169
Score = 43.6 bits (98), Expect = 1e-04
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
++ + CKCHG+SGSC KTCW R + + D
Sbjct: 26 IKKTLISSCKCHGVSGSCQQKTCWKRTATLEHITD 60
>AC006627-1|AAK85460.1| 348|Caenorhabditis elegans Abnormal cell
lineage protein 44,isoform a protein.
Length = 348
Score = 43.6 bits (98), Expect = 1e-04
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 109 VQTEMKQECKCHGMSGSCTVKTCWMRLPSFRSVGD 5
++ + CKCHG+SGSC KTCW R + + D
Sbjct: 205 IKKTLISSCKCHGVSGSCQQKTCWKRTATLEHITD 239
>Z70310-7|CAA94364.1| 607|Caenorhabditis elegans Hypothetical
protein R11A8.4 protein.
Length = 607
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 139 YAEDVVLLQHVQTEMKQECKCHGMSGSCTVKTC 41
Y +++ L+H QT +K+ +CHG CT C
Sbjct: 235 YTQNIDTLEH-QTGIKRVVECHGSFSKCTCTRC 266
>AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical
protein Y39B6A.25 protein.
Length = 542
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 319 RTWTDH-KSCHRDIHHSKKVDK*REHGNSKYFPTSESKRFVE--PRRRYL 459
R+W H K + + + ++ EHG+ YFPTS K + PR++Y+
Sbjct: 261 RSWETHCKKMNEEFDDDEDFEE--EHGDGDYFPTSIQKPHLPEIPRQQYI 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,898,555
Number of Sequences: 27780
Number of extensions: 310574
Number of successful extensions: 784
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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