Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1185
(468 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0135 + 13308839-13308899,13310146-13310495,13310574-133107... 32 0.20
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 32 0.26
06_01_0107 - 854756-854883,855126-856968 32 0.26
01_06_0451 - 29476892-29477516,29477600-29477843,29478313-294787... 30 1.1
11_07_0002 - 27171791-27172222 29 1.9
09_02_0279 + 6702517-6702948 29 1.9
06_01_0741 - 5510159-5510581,5510862-5511124,5511223-5511400,551... 29 1.9
12_02_0017 - 12357029-12357070,12357434-12357503,12357722-123578... 29 2.5
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 29 2.5
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 29 2.5
06_03_0106 + 16702019-16702600 29 2.5
05_04_0454 + 21383068-21384525 29 2.5
02_05_0409 - 28723534-28724646 29 2.5
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 26 3.1
11_03_0140 - 10637818-10638059,10638189-10638461,10639963-106404... 28 3.3
01_06_1151 + 34937738-34937855,34937959-34939244 28 3.3
05_04_0347 + 20479682-20479753,20480136-20480813,20481143-204821... 28 4.3
03_06_0199 + 32310272-32311432 28 4.3
02_02_0175 - 7465951-7466019,7466410-7466492,7467126-7467289,746... 28 4.3
02_01_0302 - 2021221-2023305 28 4.3
02_01_0174 - 1193696-1193726,1193822-1194175,1194307-1194542,119... 28 4.3
06_01_0782 - 5848381-5849394,5851143-5851255,5851337-5851440,585... 27 5.7
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 27 7.5
11_01_0625 + 5030571-5031016,5031333-5031627 27 7.5
10_08_1026 + 22400551-22401161,22401437-22401632,22401837-224018... 27 7.5
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 27 7.5
07_03_1455 - 26659480-26659758,26659907-26660149 27 7.5
03_01_0092 - 731069-731434,731569-733080 27 7.5
01_06_1141 + 34845834-34845931,34846110-34846198,34846535-348466... 27 7.5
01_05_0422 - 22018579-22018698,22019548-22019644,22019744-220199... 27 7.5
07_03_1116 - 24084162-24084201,24084481-24084570,24084640-240852... 27 10.0
07_03_0369 - 17356806-17356934,17357145-17357278,17357989-173582... 27 10.0
05_02_0027 + 5731546-5731820,5731917-5733039,5733124-5733354 27 10.0
04_01_0113 + 1188285-1188420,1189245-1189795 27 10.0
03_05_1115 + 30506986-30507396 27 10.0
02_05_0563 + 29998291-29998753,29999256-29999468,29999550-299996... 27 10.0
>10_07_0135 +
13308839-13308899,13310146-13310495,13310574-13310709,
13310806-13310942,13311041-13311164,13313393-13313871
Length = 428
Score = 32.3 bits (70), Expect = 0.20
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = -3
Query: 295 RPILSEVRTRMR*GGYRGQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDS 116
RP +SEV +++ + YN T+ P+ +RR R S ++ R P R PS R S
Sbjct: 355 RPQMSEVLEKLQ--QLQDPKYNVTS---PQVDTRR--RSSSGSVPRSPMRM-QPSPRRLS 406
Query: 115 AAGVPEYPAG-PEPACR 68
A+ P AG P PACR
Sbjct: 407 ASASPLPAAGSPLPACR 423
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 31.9 bits (69), Expect = 0.26
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 247 RGQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPD--SAAGVPEYPAGPEPA 74
R H ++ + L P RR R ES+A +P+ PSG+PD SAA V E G A
Sbjct: 417 REDHRSRDSELRPGESDRRDHRPESRA---EPTPPAQPSGKPDGESAAVVSEARNGEATA 473
>06_01_0107 - 854756-854883,855126-856968
Length = 656
Score = 31.9 bits (69), Expect = 0.26
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -3
Query: 238 HYNQTARLTPRT--PSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEPACR 68
+ + T R T R + R + AL+ P RY SP+ R AAG+P P EP R
Sbjct: 547 YVDATTRATDRAYAEATRGVDLRGGALRGAPRRYVSPT-RYTGAAGIPYRPVSTEPVLR 604
>01_06_0451 -
29476892-29477516,29477600-29477843,29478313-29478714,
29481164-29481358,29481418-29481537,29481615-29481683,
29481901-29481999,29483857-29483946,29484049-29484180,
29485062-29485173
Length = 695
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/59 (28%), Positives = 21/59 (35%)
Frame = -3
Query: 253 GYRGQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEP 77
G G H++ PS + RG R P Y SPS P + V G P
Sbjct: 229 GRSGLHHSPAPAPVGLPPSEGNARGNPAYAPRHPHEYHSPSNSPGPGSAVVGSRLGSRP 287
>11_07_0002 - 27171791-27172222
Length = 143
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 72 QAGSGPAGYSGTPAALSGRPDG 137
+AGS PAG G+PA G P G
Sbjct: 65 RAGSTPAGVRGSPAGAGGSPGG 86
>09_02_0279 + 6702517-6702948
Length = 143
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 72 QAGSGPAGYSGTPAALSGRPDG 137
+AGS PAG G+PA G P G
Sbjct: 65 RAGSTPAGVRGSPAGAGGSPGG 86
>06_01_0741 -
5510159-5510581,5510862-5511124,5511223-5511400,
5511411-5511698,5511801-5511899,5511973-5512440,
5512559-5512744,5512887-5513004,5513035-5513228
Length = 738
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 136 PSGRPDSAAGVPEYPAGPEPACRVG 62
P GRP SAAG AGP A R G
Sbjct: 655 PDGRPGSAAGASTSSAGPLAAARGG 679
>12_02_0017 -
12357029-12357070,12357434-12357503,12357722-12357852,
12358836-12358882,12359762-12360044,12360547-12362413,
12362454-12362665
Length = 883
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 190 SLRGESKALKRQPSRYGSPSGRP---DSAAGVPEYPAGPEPA 74
+L GE R PSR+ +PS P S+A P P+G PA
Sbjct: 68 NLSGEPAPTPRAPSRHATPSSSPPSTPSSASAPP-PSGRHPA 108
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 72 QAGSGPAGYSGTPAALSGRPDGLPYRDG 155
++GSG AG G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -3
Query: 283 SEVRTRMR*GGYRGQHYNQTARLTPR--TPSRRSLRGESKALKRQPS-RY 143
SE+R+R R G RG+ Y+Q +PR P R S + R PS RY
Sbjct: 125 SEMRSRDRISGSRGRSYDQRYSRSPRYSPPPRGRSPYRSPSYSRSPSPRY 174
>06_03_0106 + 16702019-16702600
Length = 193
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = -3
Query: 217 LTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEP 77
LTP P LRG A R P Y + G +S+A P P+ P P
Sbjct: 118 LTPANPPEFLLRGTLAACHRAPPFYMAAGGFGESSAS-PLAPSLPNP 163
>05_04_0454 + 21383068-21384525
Length = 485
Score = 28.7 bits (61), Expect = 2.5
Identities = 27/93 (29%), Positives = 33/93 (35%), Gaps = 6/93 (6%)
Frame = -2
Query: 329 PLNDSPALLHPTSDPL*GQNPDEVGGLPRSTLQPDGAAHP---KDAQPTEPSRRIEGSET 159
P+ D A L P D + D+ LPR PDGA P + + R S
Sbjct: 78 PVLDLDAPLSPLDDDDDDEVEDDDHDLPRPPDDPDGARSPGPSHSERMAKTDRSTTASHA 137
Query: 158 SAVSXXXXXXXXXXXXXXPGI---PRWTRTSLP 69
A S G+ PR T TSLP
Sbjct: 138 EAASTVTTPCSHAADDGGHGVTTSPRTTTTSLP 170
>02_05_0409 - 28723534-28724646
Length = 370
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 10 SALQRSYERATGWRCIASRPGRLVLVQRGIPGHQRHCLGGLTGCRTETADVSEP 171
+AL SY ++S G LVL++R P H H + LTG + P
Sbjct: 79 AALLSSYPVPGDATLLSSSRGHLVLLRRRDPFHGLHLVDALTGATRHALPLPSP 132
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 26.2 bits (55), Expect(2) = 3.1
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -1
Query: 333 PPTKRLPCTLTPDVRSSLRSEPG*--GRGVTAVNTTTRRRGSPQGRPA 196
P +R P +TP V + P RG A + + RG P G PA
Sbjct: 65 PWWRRSPSAVTPPVYPHVERSPSPPIARGWPADDDERQERGEPSGSPA 112
Score = 20.6 bits (41), Expect(2) = 3.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 123 QTVPLVSRNTPLDQNQPA 70
Q P V ++TPL +PA
Sbjct: 153 QPAPHVEQSTPLPAKEPA 170
>11_03_0140 -
10637818-10638059,10638189-10638461,10639963-10640473,
10640556-10640768,10642717-10642784,10642893-10642958,
10644862-10644961
Length = 490
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/63 (26%), Positives = 25/63 (39%)
Frame = -2
Query: 335 THPLNDSPALLHPTSDPL*GQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETS 156
T P+N +P L +NP T G A+P D+ +P R ET
Sbjct: 94 TEPVNTTPTTLPTQGGSSAAENPSTSSNQSTGTSGASGFANPTDS-VAQPPRSTSRDETP 152
Query: 155 AVS 147
++S
Sbjct: 153 SIS 155
>01_06_1151 + 34937738-34937855,34937959-34939244
Length = 467
Score = 28.3 bits (60), Expect = 3.3
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = -3
Query: 322 TTPLHSYTRRPILSEVRTRMR*GGYRGQH--YNQTARLTPRTP-SRRSLRGESKALKRQP 152
+ P ++ R + + R+ + G RG +++ + L P + +RR + G+ A +
Sbjct: 94 SAPYAAFDRGSVRAGSRSGEQSGEERGGSPMHSRVSELRPTSRRTRRPMSGDMGAFRDDG 153
Query: 151 SRYGSPSGRPDSAAGVPEYPAGP 83
S YGS + P SAA A P
Sbjct: 154 SSYGSDNDVPTSAAASYRRRASP 176
>05_04_0347 +
20479682-20479753,20480136-20480813,20481143-20482195,
20482345-20482406,20482491-20482541,20482635-20482719,
20483253-20483342,20483472-20483563,20483704-20483728
Length = 735
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/74 (25%), Positives = 28/74 (37%)
Frame = -1
Query: 312 CTLTPDVRSSLRSEPG*GRGVTAVNTTTRRRGSPQGRPADGAFEANRRL*NVSRLGTAAR 133
C + + R S R V + T GRP + R + S +G AA+
Sbjct: 170 CQIEQEFRESASGGNHPDRMVDVLQQNTNCGPDDLGRPMESMMTPKRTVKKDSLVGQAAK 229
Query: 132 QAAQTVPLVSRNTP 91
+TV + S N P
Sbjct: 230 TMPKTVNMTSSNIP 243
>03_06_0199 + 32310272-32311432
Length = 386
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 387 SHIPRAPLLRGDLVGGSALYPKKKKK 464
S PR PLLRG + GGSA + + +K
Sbjct: 203 SREPRVPLLRGGIRGGSAAHLQDGQK 228
>02_02_0175 -
7465951-7466019,7466410-7466492,7467126-7467289,
7467385-7467640,7467830-7467935,7467962-7468007,
7468316-7468388,7468508-7468577
Length = 288
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = -3
Query: 187 LRGESKALKR---QPSRYGSPSGRPDSAAGVPEYPAGPEP---ACRVG 62
LR E ++ KR QP+ P +PD +GVP +P CR+G
Sbjct: 196 LRSEYESAKRSAIQPANNYFPRAQPDLFSGVPNIMDSSDPLRQGCRIG 243
>02_01_0302 - 2021221-2023305
Length = 694
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = -2
Query: 350 PKDFRTHPLNDSPALLHPTSDPL*GQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 183
P+ THP SP + + P PD P + P + P P PS
Sbjct: 534 PQSTPTHPSYPSPPVTYTPPPPTSADRPDVRFAPPPGSYGPIPSTPPSSGSPPSPS 589
>02_01_0174 -
1193696-1193726,1193822-1194175,1194307-1194542,
1194629-1194741,1195963-1196161,1196427-1196513
Length = 339
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -3
Query: 235 YNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVPEYPAG 86
Y+ R R+P RR RG S + + GSP G P+Y G
Sbjct: 235 YSPERRGRDRSPDRRDYRGRSASPYGRGRERGSPDYGRGRERGSPDYGRG 284
>06_01_0782 -
5848381-5849394,5851143-5851255,5851337-5851440,
5851584-5851660,5851740-5852132,5852267-5852482,
5852826-5852923,5853503-5853637,5853745-5853811,
5853999-5854094,5854555-5854683
Length = 813
Score = 27.5 bits (58), Expect = 5.7
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = -3
Query: 214 TPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEPACRVGTR 56
T R+PS E A QP SGR G P PAG +P RV +R
Sbjct: 488 TNRSPSAMDPDSEV-AFDFQPYLCQYKSGRVFRLGGDPTVPAGTDPVTRVVSR 539
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 27.1 bits (57), Expect = 7.5
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2
Query: 326 LNDSPALLHPTSDPL*GQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 183
+ND A H D + G+ PD QP A P+D QP PS
Sbjct: 179 INDLDAGRH---DAVHGEQPDGERDADEHRGQPHQRAAPRDVQPPSPS 223
>11_01_0625 + 5030571-5031016,5031333-5031627
Length = 246
Score = 27.1 bits (57), Expect = 7.5
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 207 GRPADGAFEANRRL*NVSRLGTAARQAAQTVPLVSRNTPLDQNQPAGSGRDT 52
GR +GA + + +VSR G A +VPL N +D+ + SG D+
Sbjct: 144 GRGTEGAHVGHHQKPSVSREGARVGAAGSSVPL--GNNAVDEASSSTSGDDS 193
>10_08_1026 +
22400551-22401161,22401437-22401632,22401837-22401889,
22402369-22402819
Length = 436
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = -3
Query: 205 TPSRRSLRGESKALKRQPSRYGSPSGRPDS----AAGVPEYPAGPEP 77
T SRR R ++ +R P + SG PD + PE P+ P+P
Sbjct: 27 TGSRRPFRLPLRSSRRPPVAAAAASGVPDEWGDRSPSAPEPPSQPDP 73
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = -3
Query: 244 GQHYNQTARLTPRTPSRRSLRG------ESKALKRQPSRYGSPSGRPDSAAGVPEYPA 89
G+ ++ R T TP+ +++RG ESK++ PSR PS +AA +P+ A
Sbjct: 1557 GEDASRQPRRTASTPTEKAVRGGRDDFTESKSVDSTPSR-EQPSDVRRAAASLPKQEA 1613
>07_03_1455 - 26659480-26659758,26659907-26660149
Length = 173
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -3
Query: 244 GQHYNQTAR-LTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGV--PEYP 92
G H N A L P P R+ G + R+P R P PD + PE P
Sbjct: 78 GDHRNPAASSLHPTAPPLRAGPGHLRPATRRPPRQVRPKENPDWTVSLRPPELP 131
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 166 LKRQPSRYGSPSGRPDSAAGVPEYPAG-PEPACRVGTRYTA 47
L+ Q G P+ G P PAG P PA GT + A
Sbjct: 582 LQNQNVVVGRPNASGGGGGGAPTTPAGPPPPAATSGTSFLA 622
>01_06_1141 +
34845834-34845931,34846110-34846198,34846535-34846686,
34847473-34847583,34847702-34847818,34847989-34848156,
34848563-34848703
Length = 291
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 332 HPLNDSPALLHPTSDPL*GQNPDEVGGLPRSTLQPDGAAH 213
HPL P +P G P++ G PR T+ +GAAH
Sbjct: 91 HPLPQVPNFCGNGFNPWTGTLPEK-NGFPRGTMGWEGAAH 129
>01_05_0422 -
22018579-22018698,22019548-22019644,22019744-22019908,
22022274-22022339,22022441-22022540,22022662-22023304
Length = 396
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -3
Query: 214 TPRTPSR-RSLRGESKALKRQPSRYGSPSGRPDSAAGVPE 98
+P P R RSL K R PS G+ +G P G P+
Sbjct: 36 SPSIPHRGRSLHRRLKLHPRNPSLSGAGAGAPTGGNGAPQ 75
>07_03_1116 -
24084162-24084201,24084481-24084570,24084640-24085220,
24085653-24085822,24086006-24087074
Length = 649
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 175 SKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEPA 74
+ A +R P+ GS RP AG + P P P+
Sbjct: 476 NSAARRPPNPVGSAGRRPSGPAGTWQRPPPPMPS 509
>07_03_0369 -
17356806-17356934,17357145-17357278,17357989-17358247,
17358322-17358410,17358644-17358794,17358889-17359032,
17359358-17359477,17359595-17359769,17359842-17360215
Length = 524
Score = 26.6 bits (56), Expect = 10.0
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -2
Query: 329 PLNDSPALLHPTSDPL*GQNPDEVGGLPRSTLQPDGAA---HPKDAQPTEPSRRIEG 168
P + SP L PT+ L P G LPRS A HP+DA P+ PS R +G
Sbjct: 28 PEDGSPFLRLPTASDL----PVPAGQLPRSAAVGLIRALNLHPRDASPS-PSSRGDG 79
>05_02_0027 + 5731546-5731820,5731917-5733039,5733124-5733354
Length = 542
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 256 GGYRGQHYNQTARLTPRTPSRRSLRG 179
GGYRG + T LTPR+ + RG
Sbjct: 173 GGYRGFYARNTVELTPRSVNGIHKRG 198
>04_01_0113 + 1188285-1188420,1189245-1189795
Length = 228
Score = 26.6 bits (56), Expect = 10.0
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 47 GGVSRPDPAGWFWSSGVFRD 106
G + P P GW+W++G R+
Sbjct: 15 GRATAPQPMGWWWAAGGARE 34
>03_05_1115 + 30506986-30507396
Length = 136
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 423 GPRAKGARGVCETQRSAGVESRSRAQG 343
GP + A G+C+ R+A + R RA G
Sbjct: 79 GPAERVAEGMCQMLRTASWKQRRRASG 105
>02_05_0563 +
29998291-29998753,29999256-29999468,29999550-29999667,
30000227-30000355,30000438-30000810,30000890-30001147,
30001192-30001227
Length = 529
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -1
Query: 198 ADGAFEANRRL*NVSRLGTAARQAAQTVPLVSRNTPLDQNQPAG 67
ADG ++ RL ++ R A + SR +P D+ +P G
Sbjct: 20 ADGTTTSDYRLLPAWEFSSSERVVAASTSTTSRPSPADEGEPTG 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,265,588
Number of Sequences: 37544
Number of extensions: 329657
Number of successful extensions: 1395
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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