Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1185
(468 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B associ... 34 0.21
AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated trans... 34 0.21
Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate 5-... 34 0.28
L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein. 34 0.28
BC064377-1|AAH64377.1| 191|Homo sapiens TNFRSF12A protein protein. 34 0.28
AB028953-1|BAA82982.1| 763|Homo sapiens KIAA1030 protein protein. 34 0.28
Z15025-1|CAA78744.1| 1870|Homo sapiens Bat2 protein. 33 0.49
M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 33 0.49
M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 33 0.49
BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transc... 33 0.49
BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transc... 33 0.49
BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein. 33 0.49
BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein. 33 0.49
AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transc... 33 0.49
AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated trans... 33 0.49
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 33 0.49
AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein... 33 0.49
M63928-1|AAA58411.1| 260|Homo sapiens T-cell activation antigen... 32 1.1
BC012160-1|AAH12160.1| 260|Homo sapiens CD27 molecule protein. 32 1.1
AY504961-1|AAR84239.1| 260|Homo sapiens tumor necrosis factor r... 32 1.1
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 2.0
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 2.0
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 2.0
Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein. 31 2.6
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi... 31 2.6
AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein. 31 2.6
AL158217-11|CAI22163.1| 854|Homo sapiens espin protein. 30 3.5
AL031848-3|CAI19773.1| 854|Homo sapiens espin protein. 30 3.5
X16135-1|CAA34261.1| 558|Homo sapiens protein ( Human mRNA for ... 30 4.6
X05825-1|CAA29265.1| 536|Homo sapiens CSF-4 protein. 30 4.6
U22386-1|AAA64849.1| 438|Homo sapiens macrophage-colony stimula... 30 4.6
M64592-1|AAA59572.1| 554|Homo sapiens macrophage colony-stimula... 30 4.6
M37435-1|AAA52117.1| 554|Homo sapiens CSF1 protein. 30 4.6
M27087-1|AAA59573.1| 553|Homo sapiens macrophage colony-stimula... 30 4.6
BC069184-1|AAH69184.1| 558|Homo sapiens HNRPL protein protein. 30 4.6
BC021117-1|AAH21117.1| 554|Homo sapiens colony stimulating fact... 30 4.6
AL450468-2|CAH71146.1| 554|Homo sapiens colony stimulating fact... 30 4.6
AL450468-1|CAH71147.1| 438|Homo sapiens colony stimulating fact... 30 4.6
AB208952-1|BAD92189.1| 515|Homo sapiens colony stimulating fact... 30 4.6
AB044547-1|BAB18649.1| 589|Homo sapiens heterogeneous nuclear r... 30 4.6
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 4.6
AB016090-1|BAA83716.1| 802|Homo sapiens RNA binding protein pro... 30 4.6
BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like pro... 29 6.1
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 29 6.1
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 29 6.1
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 29 6.1
AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein. 29 6.1
Z83838-1|CAI19474.1| 432|Homo sapiens protein ( Human DNA seque... 29 8.0
CR456448-1|CAG30334.1| 489|Homo sapiens dJ127B20.3 protein. 29 8.0
BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein. 29 8.0
BC012187-1|AAH12187.1| 531|Homo sapiens PHD finger protein 21B ... 29 8.0
AL049760-1|CAI23608.1| 432|Homo sapiens protein ( Human DNA seq... 29 8.0
AK128800-1|BAC87613.1| 143|Homo sapiens protein ( Homo sapiens ... 29 8.0
AK128156-1|BAC87302.1| 216|Homo sapiens protein ( Homo sapiens ... 29 8.0
AK125088-1|BAC86048.1| 221|Homo sapiens protein ( Homo sapiens ... 29 8.0
>BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B
associated transcript 2 protein.
Length = 696
Score = 34.3 bits (75), Expect = 0.21
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G+P+ P GP P R TRY R
Sbjct: 14 GIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQGPSP--RPPTRYEPQR 61
>AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 34.3 bits (75), Expect = 0.21
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G+P+ P GP P R TRY R
Sbjct: 1475 GIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQGPSP--RPPTRYEPQR 1522
>Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate
5-phosphatase protein.
Length = 1258
Score = 33.9 bits (74), Expect = 0.28
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = -2
Query: 350 PKDFRTHPLNDSPALLHPTSDPL*GQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 183
P DF PL DS L P+ DPL G GG + P AHP+ P PS
Sbjct: 1050 PPDFPPPPLPDSAIFLPPSLDPLPGPVVRGRGG-AEARGPPPPKAHPRPPLPPGPS 1104
>L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein.
Length = 1149
Score = 33.9 bits (74), Expect = 0.28
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = -2
Query: 350 PKDFRTHPLNDSPALLHPTSDPL*GQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 183
P DF PL DS L P+ DPL G GG + P AHP+ P PS
Sbjct: 986 PPDFPPPPLPDSAIFLPPSLDPLPGPVVRGRGG-AEARGPPPPKAHPRPPLPPGPS 1040
>BC064377-1|AAH64377.1| 191|Homo sapiens TNFRSF12A protein protein.
Length = 191
Score = 33.9 bits (74), Expect = 0.28
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 40 TGWRCIASRPGRLVLVQRGIP--GHQRHCLGGLTGCRTETADVSEPS-IRLEGSVGWASL 210
+GWRC A PG V RG P G+ LG TGC +A++ E + + + G V + L
Sbjct: 25 SGWRCCAPWPGSKRQV-RGTPGSGNPGPGLGSRTGCLENSAELGEQADVGIWGQVAFKQL 83
Query: 211 G*AAPSGCSVDRGNP 255
AP GC +P
Sbjct: 84 ---AP-GCGKFHHSP 94
>AB028953-1|BAA82982.1| 763|Homo sapiens KIAA1030 protein protein.
Length = 763
Score = 33.9 bits (74), Expect = 0.28
Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = -3
Query: 319 TPLHSYTRRPILSEVRTRMR*GGYRGQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYG 140
+PL S T P L+ R R R G + ++ P S S Q SR G
Sbjct: 621 SPLSSRTGSPELA-ARARPRPGLLQQAEMSEITLQPPAAVSFSRKSTPSTGSPSQSSRSG 679
Query: 139 SPSGRPDS-----AAGVPEYPAGPEPA 74
SPS RP A G P P GP PA
Sbjct: 680 SPSYRPAMGFTTLATGYPSPPPGPAPA 706
>Z15025-1|CAA78744.1| 1870|Homo sapiens Bat2 protein.
Length = 1870
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G P+ P GP P R TRY R
Sbjct: 1470 GIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSP--RPPTRYEPQR 1517
>M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) gene, 3' end. ).
Length = 2142
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G P+ P GP P R TRY R
Sbjct: 1460 GIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSP--RPPTRYEPQR 1507
>M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) mRNA, complete cds.
).
Length = 2142
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G P+ P GP P R TRY R
Sbjct: 1460 GIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSP--RPPTRYEPQR 1507
>BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G P+ P GP P R TRY R
Sbjct: 1475 GIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSP--RPPTRYEPQR 1522
>BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G P+ P GP P R TRY R
Sbjct: 1475 GIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSP--RPPTRYEPQR 1522
>BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein.
Length = 2157
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G P+ P GP P R TRY R
Sbjct: 1475 GIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSP--RPPTRYEPQR 1522
>BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G P+ P GP P R TRY R
Sbjct: 1475 GIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSP--RPPTRYEPQR 1522
>AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G P+ P GP P R TRY R
Sbjct: 1475 GIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSP--RPPTRYEPQR 1522
>AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G P+ P GP P R TRY R
Sbjct: 1475 GIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSP--RPPTRYEPQR 1522
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G P+ P GP P R TRY R
Sbjct: 1475 GIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSP--RPPTRYEPQR 1522
>AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein
protein.
Length = 1537
Score = 33.1 bits (72), Expect = 0.49
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 181 GESKALKRQPSRYGS---PSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
G +AL + SR GS P G P G P+ P GP P R TRY R
Sbjct: 855 GIQQALAQLSSRQGSVTAPGGHPRHKPGPPQAPQGPSP--RPPTRYEPQR 902
>M63928-1|AAA58411.1| 260|Homo sapiens T-cell activation antigen
protein.
Length = 260
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 193 RSLRGESKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEPAC 71
RS +GES +P RY P S + E PEPAC
Sbjct: 218 RSNKGESPVEPAEPCRYSCPREEEGSTIPIQEDYRKPEPAC 258
>BC012160-1|AAH12160.1| 260|Homo sapiens CD27 molecule protein.
Length = 260
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 193 RSLRGESKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEPAC 71
RS +GES +P RY P S + E PEPAC
Sbjct: 218 RSNKGESPVEPAEPCRYSCPREEEGSTIPIQEDYRKPEPAC 258
>AY504961-1|AAR84239.1| 260|Homo sapiens tumor necrosis factor
receptor superfamily, member 7 protein.
Length = 260
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3
Query: 193 RSLRGESKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEPAC 71
RS +GES +P RY P S + E PEPAC
Sbjct: 218 RSNKGESPVEPAEPCRYSCPREEEGSTIPIQEDYRKPEPAC 258
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 211 PRTPSRRSLRGESKALK---RQPSRYGSPSGRPDSAAGVPEYPAGPEPAC 71
PRTPSRRS G S L+ PSR+ S SG +P P+ C
Sbjct: 1432 PRTPSRRSRSGSSPGLRDGSGTPSRH-SLSGSSPGMKDIPRTPSRGRSEC 1480
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 211 PRTPSRRSLRGESKALK---RQPSRYGSPSGRPDSAAGVPEYPAGPEPAC 71
PRTPSRRS G S L+ PSR+ S SG +P P+ C
Sbjct: 464 PRTPSRRSRSGSSPGLRDGSGTPSRH-SLSGSSPGMKDIPRTPSRGRSEC 512
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.1 bits (67), Expect = 2.0
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3
Query: 211 PRTPSRRSLRGESKALK---RQPSRYGSPSGRPDSAAGVPEYPAGPEPAC 71
PRTPSRRS G S L+ PSR+ S SG +P P+ C
Sbjct: 1480 PRTPSRRSRSGSSPGLRDGSGTPSRH-SLSGSSPGMKDIPRTPSRGRSEC 1528
>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
Length = 3851
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -3
Query: 244 GQHYNQTARLTPRTPSRRSLRGESKALKRQPSR-YGSPSGRPD-SAAGVPEYPAGPE 80
G H + R T P RR+ + ++ L R +R + PS P G P YP+ E
Sbjct: 3573 GDHGRHSGRHTGEEPGRRAAKPHARDLGRHEARPHSQPSSAPAMPKKGQPGYPSSAE 3629
>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
protein protein.
Length = 3926
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -3
Query: 244 GQHYNQTARLTPRTPSRRSLRGESKALKRQPSR-YGSPSGRPD-SAAGVPEYPAGPE 80
G H + R T P RR+ + ++ L R +R + PS P G P YP+ E
Sbjct: 3648 GDHGRHSGRHTGEEPGRRAAKPHARDLGRHEARPHSQPSSAPAMPKKGQPGYPSSAE 3704
>AB007894-1|BAA23707.1| 1571|Homo sapiens KIAA0434 protein.
Length = 1571
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -3
Query: 244 GQHYNQTARLTPRTPSRRSLRGESKALKRQPSR-YGSPSGRPD-SAAGVPEYPAGPE 80
G H + R T P RR+ + ++ L R +R + PS P G P YP+ E
Sbjct: 1293 GDHGRHSGRHTGEEPGRRAAKPHARDLGRHEARPHSQPSSAPAMPKKGQPGYPSSAE 1349
>AL158217-11|CAI22163.1| 854|Homo sapiens espin protein.
Length = 854
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 244 GQHYNQTARLTPRTPSRRSLRGESKALK-RQPSRYGSPSGRPDSAAGVPEYPAGPEPACR 68
G +Y Q R T + R S+ ++ RQP+R G P P +A G E P+ P A
Sbjct: 517 GDYYRQLGRCPGETLAARPGMAHSEEVRARQPARAGCPRLGP-AARGSLEGPSAPPQAAL 575
Query: 67 VGTRYTAN 44
+ + N
Sbjct: 576 LPGNHVPN 583
>AL031848-3|CAI19773.1| 854|Homo sapiens espin protein.
Length = 854
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -3
Query: 244 GQHYNQTARLTPRTPSRRSLRGESKALK-RQPSRYGSPSGRPDSAAGVPEYPAGPEPACR 68
G +Y Q R T + R S+ ++ RQP+R G P P +A G E P+ P A
Sbjct: 517 GDYYRQLGRCPGETLAARPGMAHSEEVRARQPARAGCPRLGP-AARGSLEGPSAPPQAAL 575
Query: 67 VGTRYTAN 44
+ + N
Sbjct: 576 LPGNHVPN 583
>X16135-1|CAA34261.1| 558|Homo sapiens protein ( Human mRNA for
novel heterogeneous nuclear RNP protein, L protein. ).
Length = 558
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = -3
Query: 256 GGYRGQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVPEY-PAGPE 80
GGY ++++ P R + +R PSRYG G P PEY P
Sbjct: 291 GGYHSHYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADS 350
Query: 79 PACRV 65
P V
Sbjct: 351 PVLMV 355
>X05825-1|CAA29265.1| 536|Homo sapiens CSF-4 protein.
Length = 536
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -1
Query: 219 GSPQGRPADGAFEANRRL*NVSRLGT-----AARQAAQTVPLVSRNTPLDQNQPAGSGRD 55
GSPQ RP+ GAF S +GT A A +P V + T L ++P G
Sbjct: 258 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 316
Query: 54 TPP 46
T P
Sbjct: 317 TEP 319
>U22386-1|AAA64849.1| 438|Homo sapiens macrophage-colony
stimulating factor gamma precursor protein.
Length = 438
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -1
Query: 219 GSPQGRPADGAFEANRRL*NVSRLGT-----AARQAAQTVPLVSRNTPLDQNQPAGSGRD 55
GSPQ RP+ GAF S +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 54 TPP 46
T P
Sbjct: 335 TEP 337
>M64592-1|AAA59572.1| 554|Homo sapiens macrophage
colony-stimulating factor protein.
Length = 554
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -1
Query: 219 GSPQGRPADGAFEANRRL*NVSRLGT-----AARQAAQTVPLVSRNTPLDQNQPAGSGRD 55
GSPQ RP+ GAF S +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 54 TPP 46
T P
Sbjct: 335 TEP 337
>M37435-1|AAA52117.1| 554|Homo sapiens CSF1 protein.
Length = 554
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -1
Query: 219 GSPQGRPADGAFEANRRL*NVSRLGT-----AARQAAQTVPLVSRNTPLDQNQPAGSGRD 55
GSPQ RP+ GAF S +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 54 TPP 46
T P
Sbjct: 335 TEP 337
>M27087-1|AAA59573.1| 553|Homo sapiens macrophage
colony-stimulating factor protein.
Length = 553
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -1
Query: 219 GSPQGRPADGAFEANRRL*NVSRLGT-----AARQAAQTVPLVSRNTPLDQNQPAGSGRD 55
GSPQ RP+ GAF S +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 54 TPP 46
T P
Sbjct: 335 TEP 337
>BC069184-1|AAH69184.1| 558|Homo sapiens HNRPL protein protein.
Length = 558
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = -3
Query: 256 GGYRGQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVPEY-PAGPE 80
GGY ++++ P R + +R PSRYG G P PEY P
Sbjct: 291 GGYHSHYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADS 350
Query: 79 PACRV 65
P V
Sbjct: 351 PVLMV 355
>BC021117-1|AAH21117.1| 554|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 554
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -1
Query: 219 GSPQGRPADGAFEANRRL*NVSRLGT-----AARQAAQTVPLVSRNTPLDQNQPAGSGRD 55
GSPQ RP+ GAF S +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 54 TPP 46
T P
Sbjct: 335 TEP 337
>AL450468-2|CAH71146.1| 554|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 554
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -1
Query: 219 GSPQGRPADGAFEANRRL*NVSRLGT-----AARQAAQTVPLVSRNTPLDQNQPAGSGRD 55
GSPQ RP+ GAF S +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 54 TPP 46
T P
Sbjct: 335 TEP 337
>AL450468-1|CAH71147.1| 438|Homo sapiens colony stimulating factor
1 (macrophage) protein.
Length = 438
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -1
Query: 219 GSPQGRPADGAFEANRRL*NVSRLGT-----AARQAAQTVPLVSRNTPLDQNQPAGSGRD 55
GSPQ RP+ GAF S +GT A A +P V + T L ++P G
Sbjct: 276 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 334
Query: 54 TPP 46
T P
Sbjct: 335 TEP 337
>AB208952-1|BAD92189.1| 515|Homo sapiens colony stimulating factor
1 isoform a precursor variant protein.
Length = 515
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -1
Query: 219 GSPQGRPADGAFEANRRL*NVSRLGT-----AARQAAQTVPLVSRNTPLDQNQPAGSGRD 55
GSPQ RP+ GAF S +GT A A +P V + T L ++P G
Sbjct: 330 GSPQPRPSVGAFNPGMEDILDSAMGTNWVPEEASGEASEIP-VPQGTELSPSRPGGGSMQ 388
Query: 54 TPP 46
T P
Sbjct: 389 TEP 391
>AB044547-1|BAB18649.1| 589|Homo sapiens heterogeneous nuclear
ribonucleoprotein L protein.
Length = 589
Score = 29.9 bits (64), Expect = 4.6
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = -3
Query: 256 GGYRGQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVPEY-PAGPE 80
GGY ++++ P R + +R PSRYG G P PEY P
Sbjct: 322 GGYHSHYHDEGYGPPPPHYEGRRMGPPVGGHRRGPSRYGPQYGHPPPPPPPPEYGPHADS 381
Query: 79 PACRV 65
P V
Sbjct: 382 PVLMV 386
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -3
Query: 211 PRTPSRRSLRGESKALK---RQPSRYGSPSGRPDSAAGVPEYPAGPEPAC 71
PRTPSRRS G S L+ PSR+ S SG +P P C
Sbjct: 1432 PRTPSRRSRSGSSPGLRDGSGTPSRH-SLSGSSPGMKDIPRTPFRGRSEC 1480
>AB016090-1|BAA83716.1| 802|Homo sapiens RNA binding protein
protein.
Length = 802
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -3
Query: 211 PRTPSRRSLRGESKALK---RQPSRYGSPSGRPDSAAGVPEYPAGPEPAC 71
PRTPSRRS G S L+ PSR+ S SG +P P C
Sbjct: 558 PRTPSRRSRSGSSPGLRDGSGTPSRH-SLSGSSPGMKDIPRTPFRGRSEC 606
>BC146771-1|AAI46772.1| 1649|Homo sapiens CTD-binding SR-like
protein rA9 protein.
Length = 1649
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -3
Query: 217 LTPRTPSRRSLRGESKALKRQPSRYGSPSG 128
LTPRTP+RR + +++ K+ P R +PSG
Sbjct: 329 LTPRTPARR--KRKTRRRKKVPGRKKTPSG 356
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 29.5 bits (63), Expect = 6.1
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 15 AAKELRKSDRLAVYRVPTRQAGSGPAGYSGTPAALSGRPDGLPYRDG*RFRAFDSP 182
AA E++ + VP+ SGP G PA R + R G RF + +P
Sbjct: 12 AATEIKMEEESGAPGVPSGNGASGPKGEGERPAQNEKRKEKNIKRGGNRFEPYANP 67
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 29.5 bits (63), Expect = 6.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 63 PTRQAGSGPAGYSGTPAALSGRPDGLP 143
P Q G GP G+ G P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 29.5 bits (63), Expect = 6.1
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 63 PTRQAGSGPAGYSGTPAALSGRPDGLP 143
P Q G GP G+ G P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AB040975-1|BAA96066.1| 1654|Homo sapiens KIAA1542 protein protein.
Length = 1654
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -3
Query: 217 LTPRTPSRRSLRGESKALKRQPSRYGSPSG 128
LTPRTP+RR + +++ K+ P R +PSG
Sbjct: 334 LTPRTPARR--KRKTRRRKKVPGRKKTPSG 361
>Z83838-1|CAI19474.1| 432|Homo sapiens protein ( Human DNA sequence
from clone RP1-127B20 on chromosome 22. ).
Length = 432
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 159 VSRLGTAARQAAQTVPLVSRNTPLDQNQPAGSGRDTPP 46
VS L A Q A +P V T + + P GRD PP
Sbjct: 55 VSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPP 92
>CR456448-1|CAG30334.1| 489|Homo sapiens dJ127B20.3 protein.
Length = 489
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 159 VSRLGTAARQAAQTVPLVSRNTPLDQNQPAGSGRDTPP 46
VS L A Q A +P V T + + P GRD PP
Sbjct: 55 VSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPP 92
>BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein.
Length = 765
Score = 29.1 bits (62), Expect = 8.0
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Frame = -2
Query: 347 KDFRTHPLNDSPALLHPTSDPL*GQNPDEVGGLPRSTL----QPDGAAHPKDAQPTEPSR 180
+DFR P +D HP + P+ GGLP+ST Q HP+ P R
Sbjct: 601 EDFRCPPEDD---FRHPREEDWRRPPPEHFGGLPQSTSGGHPQSTSGGHPQSISGARP-R 656
Query: 179 RIEGSETSAVS 147
G ++S
Sbjct: 657 STSGDRPRSIS 667
>BC012187-1|AAH12187.1| 531|Homo sapiens PHD finger protein 21B
protein.
Length = 531
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 159 VSRLGTAARQAAQTVPLVSRNTPLDQNQPAGSGRDTPP 46
VS L A Q A +P V T + + P GRD PP
Sbjct: 55 VSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPP 92
>AL049760-1|CAI23608.1| 432|Homo sapiens protein ( Human DNA
sequence from clone XX-PRYR7CC1 on chromosome 22. ).
Length = 432
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 159 VSRLGTAARQAAQTVPLVSRNTPLDQNQPAGSGRDTPP 46
VS L A Q A +P V T + + P GRD PP
Sbjct: 55 VSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPP 92
>AK128800-1|BAC87613.1| 143|Homo sapiens protein ( Homo sapiens
cDNA FLJ45691 fis, clone FEBRA2002260. ).
Length = 143
Score = 29.1 bits (62), Expect = 8.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 254 GLPRSTLQPDGAAHPKDAQPTEPSRRI 174
GLP + +P+GAA P+D+Q + R+
Sbjct: 40 GLPENVRRPNGAAGPQDSQDLQAHSRV 66
>AK128156-1|BAC87302.1| 216|Homo sapiens protein ( Homo sapiens
cDNA FLJ46279 fis, clone TESTI4030319. ).
Length = 216
Score = 29.1 bits (62), Expect = 8.0
Identities = 27/83 (32%), Positives = 35/83 (42%)
Frame = -1
Query: 450 SGRGPNLLRGPRAKGARGVCETQRSAGVESRSRAQGF*DPPTKRLPCTLTPDVRSSLRSE 271
+ R + L+ PR GARG +R S A G PPT R P P R R+
Sbjct: 46 AARARSSLQAPRVSGARGPHGDRRCF-----SAAPGL-CPPTPRAP---RPLPRGPSRAR 96
Query: 270 PG*GRGVTAVNTTTRRRGSPQGR 202
G G A++ +R GS R
Sbjct: 97 RGEAEGPRAISAASRPTGSSSYR 119
>AK125088-1|BAC86048.1| 221|Homo sapiens protein ( Homo sapiens
cDNA FLJ43098 fis, clone CTONG1000488. ).
Length = 221
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 288 SSLRSEPG*GRGVTAVNTTTRRRGSPQGRPADGA 187
SS S+PG G G NT +++ Q RP GA
Sbjct: 13 SSRSSDPGKGSGPPPANTHPQKQQQQQARPVHGA 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,013,630
Number of Sequences: 237096
Number of extensions: 1828274
Number of successful extensions: 7877
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 7027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7872
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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