BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1185
(468 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH1111... 35 0.048
AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,... 35 0.048
AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,... 35 0.048
AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein. 33 0.25
BT003637-1|AAO39641.1| 525|Drosophila melanogaster AT18606p pro... 31 0.78
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 31 0.78
AE014134-1160|AAF52434.2| 492|Drosophila melanogaster CG11322-P... 31 0.78
AE014297-1832|AAF55042.1| 588|Drosophila melanogaster CG3259-PA... 31 1.0
BT025960-1|ABG02204.1| 433|Drosophila melanogaster IP16063p pro... 30 1.4
AJ252082-1|CAB64385.1| 979|Drosophila melanogaster BAB-I protei... 30 1.4
AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB... 30 1.4
AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC... 30 1.4
AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA... 30 1.4
AE014296-173|AAS64927.1| 526|Drosophila melanogaster CG9097-PA,... 30 1.4
AE014296-172|AAF47439.2| 977|Drosophila melanogaster CG9097-PB,... 30 1.4
BT029146-1|ABJ17080.1| 391|Drosophila melanogaster RT01026p pro... 29 3.1
AF363232-1|AAK77133.1| 266|Drosophila melanogaster intermediate... 29 3.1
AE014296-2457|AAS65004.1| 391|Drosophila melanogaster CG11551-P... 29 3.1
L06475-1|AAB59219.1| 226|Drosophila melanogaster brain-specific... 29 4.1
AE014296-335|AAF47551.2| 858|Drosophila melanogaster CG7991-PA ... 29 4.1
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro... 28 5.5
AF095926-1|AAC97116.1| 320|Drosophila melanogaster intermediate... 28 5.5
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P... 28 5.5
AY118822-1|AAM50682.1| 734|Drosophila melanogaster GH25986p pro... 28 7.2
AE014296-1152|AAS65070.1| 1833|Drosophila melanogaster CG10107-P... 28 7.2
AE014296-1151|AAF50646.3| 1833|Drosophila melanogaster CG10107-P... 28 7.2
AE013599-2290|AAF57991.1| 734|Drosophila melanogaster CG7813-PA... 28 7.2
>AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH11110
protein.
Length = 793
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 244 GQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVP-EYPAGPEPAC 71
G+ Y+ + + +P R S + L R PSRYGSP P P E PAG + C
Sbjct: 44 GRGYDNGSGVPGDSPERLSPERMRRRLDRSPSRYGSPHREPYMRGPPPAERPAGYKVLC 102
>AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,
isoform B protein.
Length = 793
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 244 GQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVP-EYPAGPEPAC 71
G+ Y+ + + +P R S + L R PSRYGSP P P E PAG + C
Sbjct: 44 GRGYDNGSGVPGDSPERLSPERMRRRLDRSPSRYGSPHREPYMRGPPPAERPAGYKVLC 102
>AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,
isoform A protein.
Length = 793
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 244 GQHYNQTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVP-EYPAGPEPAC 71
G+ Y+ + + +P R S + L R PSRYGSP P P E PAG + C
Sbjct: 44 GRGYDNGSGVPGDSPERLSPERMRRRLDRSPSRYGSPHREPYMRGPPPAERPAGYKVLC 102
>AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.
Length = 2715
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 211 PRTPSRRSLRGESKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEPA 74
P TP+ S G ++++Q + P G P P P GP+PA
Sbjct: 42 PPTPNNNSNNGSDPSIQQQQNVAPHPYGAPPPPGSGPGGPPGPDPA 87
>BT003637-1|AAO39641.1| 525|Drosophila melanogaster AT18606p
protein.
Length = 525
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 289 SDVGCKSAGESFSGWVLKSLGPRSALNTCRSLSLTYPARPF 411
S V C F G+V +SL P +LN C L+LTY F
Sbjct: 277 SSVPCLERHPKFYGFV-RSLSPSISLNMCHPLALTYRQNNF 316
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 157 QPSRYGSPSGRPDSAAGVPE-YPAGPEPACRVGT 59
QP Y P+ RP P YP P+P C+ T
Sbjct: 1411 QPKTYSPPTSRPLITTSKPRCYPGSPDPECQPAT 1444
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 157 QPSRY-GSPSGRPDSAAGVPEYPAGPEPACRVGTRYT 50
+P+ Y GS R A G YP P+P+C+ TR T
Sbjct: 557 KPNCYPGSTDTRCPQAPGPRCYPGSPDPSCQPPTRIT 593
>AE014134-1160|AAF52434.2| 492|Drosophila melanogaster CG11322-PA
protein.
Length = 492
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +1
Query: 289 SDVGCKSAGESFSGWVLKSLGPRSALNTCRSLSLTYPARPF 411
S V C F G+V +SL P +LN C L+LTY F
Sbjct: 244 SSVPCLERHPKFYGFV-RSLSPSISLNMCHPLALTYRQNNF 283
>AE014297-1832|AAF55042.1| 588|Drosophila melanogaster CG3259-PA
protein.
Length = 588
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 287 PL*GQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRR 177
PL +N EV PR++L+P +A P A+P P RR
Sbjct: 352 PLTRENSKEVNQRPRTSLRPP-SARPASARPGAPRRR 387
>BT025960-1|ABG02204.1| 433|Drosophila melanogaster IP16063p
protein.
Length = 433
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -3
Query: 211 PRTPSRRSLRGESKALKRQPSRYGS-PSGRPDSAAGVPEYPAGPEPA 74
P TP+ S G ++++Q P G P P P GP+PA
Sbjct: 42 PPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPPGSGPGGPPGPDPA 88
>AJ252082-1|CAB64385.1| 979|Drosophila melanogaster BAB-I protein
protein.
Length = 979
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 141 AARQAAQTVPLVSRNTPLDQNQP--AGSGRDTPPTGRSFVTPLQRARV 4
A+ QA V L S P+ Q Q GSG D+P + RS T + R+
Sbjct: 2 ASAQAETNVGLASEQGPVAQRQRKGTGSGADSPKSNRSSPTQQEEKRI 49
>AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB,
isoform B protein.
Length = 2716
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -3
Query: 211 PRTPSRRSLRGESKALKRQPSRYGS-PSGRPDSAAGVPEYPAGPEPA 74
P TP+ S G ++++Q P G P P P GP+PA
Sbjct: 42 PPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPPGSGPGGPPGPDPA 88
>AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC,
isoform C protein.
Length = 2556
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -3
Query: 211 PRTPSRRSLRGESKALKRQPSRYGS-PSGRPDSAAGVPEYPAGPEPA 74
P TP+ S G ++++Q P G P P P GP+PA
Sbjct: 42 PPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPPGSGPGGPPGPDPA 88
>AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA,
isoform A protein.
Length = 2703
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -3
Query: 211 PRTPSRRSLRGESKALKRQPSRYGS-PSGRPDSAAGVPEYPAGPEPA 74
P TP+ S G ++++Q P G P P P GP+PA
Sbjct: 42 PPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPPGSGPGGPPGPDPA 88
>AE014296-173|AAS64927.1| 526|Drosophila melanogaster CG9097-PA,
isoform A protein.
Length = 526
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 141 AARQAAQTVPLVSRNTPLDQNQP--AGSGRDTPPTGRSFVTPLQRARV 4
A+ QA V L S P+ Q Q GSG D+P + RS T + R+
Sbjct: 2 ASAQAETNVGLASEQGPVAQRQRKGTGSGADSPKSNRSSPTQQEEKRI 49
>AE014296-172|AAF47439.2| 977|Drosophila melanogaster CG9097-PB,
isoform B protein.
Length = 977
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 141 AARQAAQTVPLVSRNTPLDQNQP--AGSGRDTPPTGRSFVTPLQRARV 4
A+ QA V L S P+ Q Q GSG D+P + RS T + R+
Sbjct: 2 ASAQAETNVGLASEQGPVAQRQRKGTGSGADSPKSNRSSPTQQEEKRI 49
>BT029146-1|ABJ17080.1| 391|Drosophila melanogaster RT01026p
protein.
Length = 391
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = -3
Query: 190 SLRGESKALKRQPSRYGSPSGRPDSAAGV------PEYPAGPEPACRVGT 59
SL + L ++ + GSP G P +AA V P P P PA VG+
Sbjct: 80 SLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGS 129
>AF363232-1|AAK77133.1| 266|Drosophila melanogaster intermediate
neuroblasts defective protein.
Length = 266
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = -3
Query: 190 SLRGESKALKRQPSRYGSPSGRPDSAAGV------PEYPAGPEPACRVGT 59
SL + L ++ + GSP G P +AA V P P P PA VG+
Sbjct: 1 SLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGS 50
>AE014296-2457|AAS65004.1| 391|Drosophila melanogaster CG11551-PA
protein.
Length = 391
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = -3
Query: 190 SLRGESKALKRQPSRYGSPSGRPDSAAGV------PEYPAGPEPACRVGT 59
SL + L ++ + GSP G P +AA V P P P PA VG+
Sbjct: 80 SLLSDRPNLSQKKEKLGSPGGSPTAAAAVAAAAMLPSIPMLPYPASYVGS 129
>L06475-1|AAB59219.1| 226|Drosophila melanogaster brain-specific
homeobox protein protein.
Length = 226
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 447 GRGPNLLRGPRAKGARGVCETQRSAGVESRSRAQGF*DPPTK 322
G G N LR R + AR V + +G+E R Q + PP +
Sbjct: 121 GMGVNALRHCRRRKARTVFSDPQLSGLEKRFEGQRYLSPPER 162
>AE014296-335|AAF47551.2| 858|Drosophila melanogaster CG7991-PA
protein.
Length = 858
Score = 28.7 bits (61), Expect = 4.1
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = -1
Query: 333 PPTKRLPCTL-TPDVRSSLRSEPG*GRGVTAVNTT-TRRRGSPQGRPADGAFEANRRL*N 160
P T+ +P L R ++ P G + TT T + P G A+ F +N+ L +
Sbjct: 309 PRTEPVPTQLDVTKKRYRVKQLPSGGEPLNGYATTPTAHQAPPNGHLANQKFFSNQNLLD 368
Query: 159 VSRLG--TAARQAAQTVPLVSRNTP 91
VSR G +A AA T L+ TP
Sbjct: 369 VSRSGPSSAPVAAASTKELLFVCTP 393
>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p
protein.
Length = 1872
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 229 QTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRP 122
Q A PR P + RG +++ + SP+GRP
Sbjct: 447 QAASSAPRPPQQAPTRGRHASIQSTSTTTSSPAGRP 482
>AF095926-1|AAC97116.1| 320|Drosophila melanogaster intermediate
neuroblasts defectiveprotein protein.
Length = 320
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = -3
Query: 190 SLRGESKALKRQPSRYGSPSGRPDSAAGV------PEYPAGPEPACRVGT 59
SL + L ++ + GSP G P +AA V P P P PA VG+
Sbjct: 9 SLLSDRPNLSQKKEKLGSPVGSPTAAAAVAAAAMLPSIPMLPYPASYVGS 58
>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
protein.
Length = 1831
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 229 QTARLTPRTPSRRSLRGESKALKRQPSRYGSPSGRP 122
Q A PR P + RG +++ + SP+GRP
Sbjct: 446 QAASSAPRPPQQAPTRGRHASIQSTSTTTSSPAGRP 481
>AY118822-1|AAM50682.1| 734|Drosophila melanogaster GH25986p
protein.
Length = 734
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 175 SKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
SK L +Q + SG+P A + E P G + +G + T ++
Sbjct: 490 SKELAKQEEKKSGDSGKPKEKASLSEIPQGSDQKPVLGMQITESK 534
>AE014296-1152|AAS65070.1| 1833|Drosophila melanogaster CG10107-PC,
isoform C protein.
Length = 1833
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 447 GRGPNLLRGPRAKGARGVCETQRSAGVESRSRAQG 343
GRG +RG RA+G R V E + S A+G
Sbjct: 1046 GRGSMAMRGGRARGGRRVPEVDPVVLLSSEDEAEG 1080
>AE014296-1151|AAF50646.3| 1833|Drosophila melanogaster CG10107-PA,
isoform A protein.
Length = 1833
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 447 GRGPNLLRGPRAKGARGVCETQRSAGVESRSRAQG 343
GRG +RG RA+G R V E + S A+G
Sbjct: 1046 GRGSMAMRGGRARGGRRVPEVDPVVLLSSEDEAEG 1080
>AE013599-2290|AAF57991.1| 734|Drosophila melanogaster CG7813-PA
protein.
Length = 734
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 175 SKALKRQPSRYGSPSGRPDSAAGVPEYPAGPEPACRVGTRYTANR 41
SK L +Q + SG+P A + E P G + +G + T ++
Sbjct: 490 SKELAKQEEKKSGDSGKPKEKASLSEIPQGSDQKPVLGMQITESK 534
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,734,364
Number of Sequences: 53049
Number of extensions: 523989
Number of successful extensions: 2613
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2611
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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