Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1182
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           26   0.43 
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    24   1.3  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    23   2.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.3  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 518 LIAFPIISDASFKLVHKFYFPTTL 589
           L+ +    D+SF++ H F++P  L
Sbjct: 335 LLIYDFFKDSSFRIQHHFFYPDPL 358


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +1

Query: 253 SQIAGFDNSRLKYSYNGCPTLQTETHYCFTA 345
           SQ AGFD S LK  Y      Q +   CF A
Sbjct: 27  SQKAGFDLSDLKSMYEANSEEQMKKFGCFEA 57


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +1

Query: 253 SQIAGFDNSRLKYSYNGCPTLQTETHYCFTA 345
           SQ AGFD S LK  Y      Q +   CF A
Sbjct: 27  SQKAGFDLSDLKSMYESNSEEQMKKLGCFEA 57


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +2

Query: 56  KIIDMSIQIDLNIIVSFKEYGSKSAL 133
           K +D+++ +DL+I  + +EYG  S +
Sbjct: 674 KDVDVTLPLDLHIQNAIREYGLGSTV 699


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 59  FFFVQMHRLPPLIIDDSL 6
           F+F+  H  PP ++ +SL
Sbjct: 231 FYFMLNHNYPPFMLSNSL 248


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 59  FFFVQMHRLPPLIIDDSL 6
           F+F+  H  PP ++ +SL
Sbjct: 231 FYFMLNHNYPPFMLSNSL 248


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,480
Number of Sequences: 438
Number of extensions: 3580
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)