Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1180
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036700-2|AAB88365.1|  550|Caenorhabditis elegans Hypothetical ...    32   0.36 
Z81527-14|CAB04278.2|  506|Caenorhabditis elegans Hypothetical p...    31   1.1  
Z79753-8|CAB02089.2|  506|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U50191-8|AAK31551.3|  296|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z66565-2|CAA91478.2|  502|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AC024798-2|AAK29923.1|  352|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z75530-8|CAA99792.2|  405|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical ...    28   5.8  
AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical ...    28   5.8  

>AF036700-2|AAB88365.1|  550|Caenorhabditis elegans Hypothetical
           protein M04G7.2 protein.
          Length = 550

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
 Frame = +2

Query: 131 LTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMY-IAEKPLSIDDI 307
           LT  SPS  ++S+S+E + ++  N  ++ A     R A+   KL + + ++ + +++DD 
Sbjct: 209 LTADSPSSRRTSKSLEENSSETTNDSISLADDEETREAY--RKLFKDFAMSSQKMTLDDF 266

Query: 308 VKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNV 412
            +E SN  G     L TV+++ V   N  +  SN+
Sbjct: 267 KQEFSNLPGDPPSDLCTVFNHPVN--NKKNRYSNI 299


>Z81527-14|CAB04278.2|  506|Caenorhabditis elegans Hypothetical
           protein F35E12.8 protein.
          Length = 506

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
 Frame = +2

Query: 197 LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK-----EGSNKVGTNSIFLGTV 361
           LN+ L   +   L     DN +  + + ++    D ++K     +G N    NS F+G +
Sbjct: 145 LNLNLQPTQTYTLESPTNDNVVINVALVDQIGKTDIVIKLIYVYDGPN---VNSRFVGNL 201

Query: 362 YDYGVKSPNAASTSSNVT 415
           YDY V SP    +S N T
Sbjct: 202 YDY-VNSPTLMKSSGNST 218


>Z79753-8|CAB02089.2|  506|Caenorhabditis elegans Hypothetical
           protein F35E12.8 protein.
          Length = 506

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
 Frame = +2

Query: 197 LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK-----EGSNKVGTNSIFLGTV 361
           LN+ L   +   L     DN +  + + ++    D ++K     +G N    NS F+G +
Sbjct: 145 LNLNLQPTQTYTLESPTNDNVVINVALVDQIGKTDIVIKLIYVYDGPN---VNSRFVGNL 201

Query: 362 YDYGVKSPNAASTSSNVT 415
           YDY V SP    +S N T
Sbjct: 202 YDY-VNSPTLMKSSGNST 218


>U50191-8|AAK31551.3|  296|Caenorhabditis elegans Hypothetical
           protein T14B4.3 protein.
          Length = 296

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/58 (27%), Positives = 23/58 (39%)
 Frame = -2

Query: 616 AVGFAQFAHLSFGQRPRVGVDQAHNHAVDFESQHTIVFYSFSGRYTFEYNKHGFKFLD 443
           +V    F   +FG    VG  QA      F+    ++     G   F+Y+ H F F D
Sbjct: 38  SVSLLNFNKNAFGLGAAVGAHQAIGDEKLFQKPKALLIIVIDGLENFDYDGHAFNFTD 95


>Z66565-2|CAA91478.2|  502|Caenorhabditis elegans Hypothetical
           protein T04F8.2 protein.
          Length = 502

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = -2

Query: 694 WSALIAVKLFSNKNLLSCLVFRVHQSAVGFAQFAHLSFGQRPRVGVDQAHNHAVDFESQH 515
           +S ++A+  FSN   LSCLV +    +     FA  + G R R+G D +H    +F    
Sbjct: 422 FSLILALTTFSNFVALSCLVHQFWPKSSYRKFFADYTNGHR-RLGRDDSH----EFNDYD 476

Query: 514 TIVFYS 497
             +FY+
Sbjct: 477 NFLFYA 482


>AC024798-2|AAK29923.1|  352|Caenorhabditis elegans Hypothetical
           protein Y48G9A.9a protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +2

Query: 119 NLNSLTEASPSLGQSSESVESDENKRLNVK-LNNARVANLRIAHGDNKLSQMY 274
           N N++ E  P+  QSS   E+D++ R  V+ LNN  +A  ++  G   L++ Y
Sbjct: 17  NNNNVNEKRPASAQSSNGTETDDHHRKYVETLNNFIIATEKL--GIEGLAKQY 67


>Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = +2

Query: 107 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEK 286
           TNA  LN++T ++ S   SSES  S   +  + K  +   A+ ++ H + + +  Y  + 
Sbjct: 163 TNATILNAMTASTSSNDSSSESGVSGVKEAKDEKKKSKIQADEKLRHEERQSTSDYTDDD 222

Query: 287 PL 292
           P+
Sbjct: 223 PI 224


>Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical
           protein T23B5.3b protein.
          Length = 540

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = +2

Query: 107 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEK 286
           TNA  LN++T ++ S   SSES  S   +  + K  +   A+ ++ H + + +  Y  + 
Sbjct: 163 TNATILNAMTASTSSNDSSSESGVSGVKEAKDEKKKSKIQADEKLRHEERQSTSDYTDDD 222

Query: 287 PL 292
           P+
Sbjct: 223 PI 224


>Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = +2

Query: 107 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEK 286
           TNA  LN++T ++ S   SSES  S   +  + K  +   A+ ++ H + + +  Y  + 
Sbjct: 163 TNATILNAMTASTSSNDSSSESGVSGVKEAKDEKKKSKIQADEKLRHEERQSTSDYTDDD 222

Query: 287 PL 292
           P+
Sbjct: 223 PI 224


>Z75530-8|CAA99792.2|  405|Caenorhabditis elegans Hypothetical
           protein C47E8.3 protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -3

Query: 363 YTVPRKMLLVPTLLEPSLTMSSIDSGFSAIYIWLN-LLSPCAMRKLATRALFSFTFNRLF 187
           Y + + + +  T+ E ++  SS++ GF  +Y +LN ++S   +     R    F  NRL 
Sbjct: 275 YLLSQSLQVFLTVWE-TINRSSLEDGFPTMYSYLNDIVSIFTLLASCLRFPIYFCCNRLI 333

Query: 186 SSDSTDSL 163
            + S D+L
Sbjct: 334 HTASVDTL 341


>AL132862-5|CAB70227.1|  419|Caenorhabditis elegans Hypothetical
           protein Y73F8A.9 protein.
          Length = 419

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -1

Query: 632 SCTPECSWICAIRAPLVRTAAPRWGRSSTQSC 537
           SC P C   C   AP+     P+  +  TQ C
Sbjct: 131 SCMPACEQSCVAPAPVTVQCVPQCQQKCTQQC 162


>AL132862-4|CAB60533.1|  420|Caenorhabditis elegans Hypothetical
           protein Y73F8A.8 protein.
          Length = 420

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -1

Query: 632 SCTPECSWICAIRAPLVRTAAPRWGRSSTQSC 537
           SC P C   C   AP+     P+  +  TQ C
Sbjct: 132 SCMPACEQSCVAPAPVTVQCVPQCQQKCTQQC 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,538,499
Number of Sequences: 27780
Number of extensions: 349817
Number of successful extensions: 1056
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)