Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1179
         (309 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   2.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    22   4.5  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    22   4.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    21   7.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    21   7.9  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 77  LYWPSLTRKKPKKQ*KEVAVTDKEPAADDK*TRKE 181
           L+ P L  ++PK+Q ++    D   A DDK + +E
Sbjct: 458 LFKPYLLDEEPKQQSQQQQRPDSALAEDDKDSTRE 492


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 53  CSWPPVWWLYWPSLTR 100
           C WP  +W ++ S T+
Sbjct: 464 CRWPDSFWRFYNSKTK 479


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 69  SGGFIGPRLRGRSQKSSKR 125
           +GG+  PRLR  S+ SS R
Sbjct: 54  AGGWYTPRLRRSSRPSSMR 72


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 50  QCSWPPVWWLYW 85
           +CS P V WL W
Sbjct: 241 RCSQPEVGWLGW 252


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 50  QCSWPPVWWLYW 85
           +CS P V WL W
Sbjct: 241 RCSQPEVGWLGW 252


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,473
Number of Sequences: 2352
Number of extensions: 3028
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 19884282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)