Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1176
(729 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-... 252 5e-66
UniRef50_Q4QQE2 Cluster: Endonuclease-reverse transcriptase; n=3... 37 0.44
UniRef50_UPI0000E49710 Cluster: PREDICTED: similar to endonuclea... 35 2.3
UniRef50_Q95QJ4 Cluster: Putative uncharacterized protein; n=2; ... 34 3.1
UniRef50_UPI0000E4916E Cluster: PREDICTED: similar to reverse tr... 34 4.1
UniRef50_UPI0000E47849 Cluster: PREDICTED: similar to ORF2-encod... 34 4.1
UniRef50_Q7UQU1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.1
UniRef50_A6RVX5 Cluster: Predicted protein; n=1; Botryotinia fuc... 33 7.2
UniRef50_UPI0000E47DE5 Cluster: PREDICTED: similar to endonuclea... 33 9.5
UniRef50_Q9A4C3 Cluster: L-aspartate oxidase; n=10; Alphaproteob... 33 9.5
>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
protein; n=25; Arthropoda|Rep: Endonuclease and reverse
transcriptase-like protein - Bombyx mori (Silk moth)
Length = 986
Score = 252 bits (618), Expect = 5e-66
Identities = 115/123 (93%), Positives = 119/123 (96%)
Frame = -1
Query: 372 LTDRLEPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPL 193
LTDRLEPL LRRDFGSLCILYRMFHG+CSEE+FE+IPASRFYH TARHRSR+HPYYLEPL
Sbjct: 864 LTDRLEPLGLRRDFGSLCILYRMFHGECSEELFEMIPASRFYHRTARHRSRVHPYYLEPL 923
Query: 192 RSSTVRFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSDRQRLGSAPGIAEVH 13
RSSTVRFQRSFL RTIRLWNELPSTVFPERYDMSFFKRGLWRVLS RQRLGSAPGIAEVH
Sbjct: 924 RSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSGRQRLGSAPGIAEVH 983
Query: 12 GRR 4
GRR
Sbjct: 984 GRR 986
>UniRef50_Q4QQE2 Cluster: Endonuclease-reverse transcriptase; n=3;
Bilateria|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 945
Score = 37.1 bits (82), Expect = 0.44
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = -1
Query: 360 LEPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSST 181
L PLS RR G L + YR+ + M + SR H R H ++ RS+
Sbjct: 847 LFPLSYRRIRGDLILAYRILNDDLGTNMSYLFLPSRAEH------LRGHSKKVQKPRSNR 900
Query: 180 VRFQRSFLLRTIRLWNELPSTV 115
+R + F R + WN LP V
Sbjct: 901 LRLEFRFSHRVVNYWNSLPEHV 922
>UniRef50_UPI0000E49710 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 773
Score = 34.7 bits (76), Expect = 2.3
Identities = 27/104 (25%), Positives = 47/104 (45%)
Frame = -1
Query: 360 LEPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSST 181
L L+ RR + +Y++ HG + + + F+ +R+R H Y + + +
Sbjct: 659 LPSLAYRRHRADMIQIYKIMHG------LDELDLAHFFDHPTDNRTRGHRYKIVKKKVYS 712
Query: 180 VRFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSDRQ 49
SF R+I WN L S+V E ++ FK L + S R+
Sbjct: 713 KLRHGSFSQRSINEWNNL-SSVVVESKSLNRFKSNLLKFWSTRK 755
>UniRef50_Q95QJ4 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 276
Score = 34.3 bits (75), Expect = 3.1
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 YRRPWTSAMPGAEPSRCLSLNT--LHKPRLKKDMS*RSGNTVEGSSFHNRMVRSKKDLWK 175
Y +S+ P + PSR LSL + L KPR +GN+++ H ++ ++ D WK
Sbjct: 33 YELECSSSTPDSFPSRLLSLTSSLLEKPRFSDVTFKFAGNSLKSVPAHKYVLAARTDFWK 92
>UniRef50_UPI0000E4916E Cluster: PREDICTED: similar to reverse
transcriptase-like protein; n=5; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like protein - Strongylocentrotus
purpuratus
Length = 1043
Score = 33.9 bits (74), Expect = 4.1
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Frame = -1
Query: 354 PLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARH--RSRIHPYYLEPLRSST 181
P+ R + L + Y+ H + ++ H RH RS P L RS T
Sbjct: 946 PIEKRITYKILTMTYKCIHKMAPSYLQNLLSL----HQPGRHGLRSGNDPTLLSVPRSRT 1001
Query: 180 VRFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGL 73
RSF + RLWN LP V ++ F+R L
Sbjct: 1002 RFGDRSFSVSAPRLWNNLPQAV-RSSPSLAIFQRSL 1036
>UniRef50_UPI0000E47849 Cluster: PREDICTED: similar to ORF2-encoded
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to ORF2-encoded protein -
Strongylocentrotus purpuratus
Length = 570
Score = 33.9 bits (74), Expect = 4.1
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -1
Query: 354 PLSLRRDFGSLCILYRMFHGKCSEEMFEII-PASRFYHSTARHRSRIHPYYLEPLRSSTV 178
PL R F L + Y+ FH + +I P +R R S H + R+ T
Sbjct: 470 PLQQRIKFKILMLTYKAFHKLAPSYLSALITPKTRTSSMRLRSSSTAHLHLAPGPRTHTR 529
Query: 177 RFQRSFLLRTIRLWNELPSTV 115
R+F + +LWN LP +
Sbjct: 530 YGNRAFSVCAPQLWNNLPHEI 550
>UniRef50_Q7UQU1 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 100
Score = 33.9 bits (74), Expect = 4.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 264 PASRFYHSTARHRSRIHPYYLEPLRSSTVRFQRSFLLRTIRLW 136
PA++ ++RHR P PLRS +RF F L LW
Sbjct: 43 PAAQLAQCSSRHRKTTRPLNSHPLRSVNLRFLTPFALSRTVLW 85
>UniRef50_A6RVX5 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 113
Score = 33.1 bits (72), Expect = 7.2
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -2
Query: 176 VSRDLFCYVPSGYGMSSPPRCFPSAMTCPSSNEACGEY*AIGSG 45
+S D C SGY SP C SA C ++++ CG Y +GSG
Sbjct: 46 LSPDGSCGGDSGYTCESPKCCSESAY-CGNTSDFCGTYCDVGSG 88
>UniRef50_UPI0000E47DE5 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 862
Score = 32.7 bits (71), Expect = 9.5
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -1
Query: 276 FEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRFQRSFLLRTIRLWNELPSTV 115
F+ + S+F+ +R H + + R +T Q SF +R++ WN LP V
Sbjct: 771 FDRVNPSKFFQLATGSTTRGHDFKIVKQRFNTRLRQYSFSIRSVNNWNALPKEV 824
>UniRef50_Q9A4C3 Cluster: L-aspartate oxidase; n=10;
Alphaproteobacteria|Rep: L-aspartate oxidase -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 511
Score = 32.7 bits (71), Expect = 9.5
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -3
Query: 238 RPPPE*NSSILPGATAVIHSAFPEIFFATYHPVME*APLHGVSRAL 101
R P + L G A++ +A + F A YHP E AP V+RAL
Sbjct: 244 RDPAPLATEALRGEGAILRNADGKAFMADYHPAKELAPRDVVARAL 289
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,105,207
Number of Sequences: 1657284
Number of extensions: 17327434
Number of successful extensions: 40434
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 38972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40422
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -