Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1176
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical pr... 34 0.091
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p... 29 2.6
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 29 2.6
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 29 2.6
U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein. 29 2.6
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 29 2.6
Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guany... 29 3.4
AC024876-12|AAF60896.2| 498|Caenorhabditis elegans Hypothetical... 29 3.4
>Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical
protein F22G12.6 protein.
Length = 276
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 YRRPWTSAMPGAEPSRCLSLNT--LHKPRLKKDMS*RSGNTVEGSSFHNRMVRSKKDLWK 175
Y +S+ P + PSR LSL + L KPR +GN+++ H ++ ++ D WK
Sbjct: 33 YELECSSSTPDSFPSRLLSLTSSLLEKPRFSDVTFKFAGNSLKSVPAHKYVLAARTDFWK 92
>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
protein 2, isoform a protein.
Length = 1538
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 383 EFFNVLDSVKVNPILYAVGTAPLVANVGKLSRAVKQ*CVSVRRVGQPL 526
+F+N+LD + V L+A G A + GK +K + V RV +PL
Sbjct: 802 DFWNILDGIVVTCALFAFGFAGTEGSAGKNLNTIKS--LRVLRVLRPL 847
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 383 EFFNVLDSVKVNPILYAVGTAPLVANVGKLSRAVKQ*CVSVRRVGQPL 526
+F+N+LD + V L+A G A + GK +K + V RV +PL
Sbjct: 802 DFWNILDGIVVTCALFAFGFAGTEGSAGKNLNTIKS--LRVLRVLRPL 847
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 383 EFFNVLDSVKVNPILYAVGTAPLVANVGKLSRAVKQ*CVSVRRVGQPL 526
+F+N+LD + V L+A G A + GK +K + V RV +PL
Sbjct: 921 DFWNILDGIVVTCALFAFGFAGTEGSAGKNLNTIKS--LRVLRVLRPL 966
>U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein.
Length = 1053
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 383 EFFNVLDSVKVNPILYAVGTAPLVANVGKLSRAVKQ*CVSVRRVGQPL 526
+F+N+LD + V L+A G A + GK +K + V RV +PL
Sbjct: 408 DFWNILDGIVVTCALFAFGFAGTEGSAGKNLNTIKS--LRVLRVLRPL 453
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 383 EFFNVLDSVKVNPILYAVGTAPLVANVGKLSRAVKQ*CVSVRRVGQPL 526
+F+N+LD + V L+A G A + GK +K + V RV +PL
Sbjct: 921 DFWNILDGIVVTCALFAFGFAGTEGSAGKNLNTIKS--LRVLRVLRPL 966
>Z78012-8|CAB01418.2| 945|Caenorhabditis elegans Hypothetical protein
F57F5.2 protein.
Length = 945
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 8 RPWTSAMPGAEPSRCLSLNTLHKPRLKKDMS*RSGNTVEGSSFHNRMVRSKKD 166
R SA P R L+ L K + + M+ G++V SS H+ +RSKKD
Sbjct: 871 RTTVSAKP-TTTRRLLNQKDLEKEKKRSSMA---GSSVTSSSAHSHSIRSKKD 919
>Z75953-6|CAB00103.2| 945|Caenorhabditis elegans Hypothetical protein
F57F5.2 protein.
Length = 945
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 8 RPWTSAMPGAEPSRCLSLNTLHKPRLKKDMS*RSGNTVEGSSFHNRMVRSKKD 166
R SA P R L+ L K + + M+ G++V SS H+ +RSKKD
Sbjct: 871 RTTVSAKP-TTTRRLLNQKDLEKEKKRSSMA---GSSVTSSSAHSHSIRSKKD 919
>AY275181-1|AAP32289.1| 945|Caenorhabditis elegans soluble guanylyl
cyclase GCY-33 protein.
Length = 945
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 8 RPWTSAMPGAEPSRCLSLNTLHKPRLKKDMS*RSGNTVEGSSFHNRMVRSKKD 166
R SA P R L+ L K + + M+ G++V SS H+ +RSKKD
Sbjct: 871 RTTVSAKP-TTTRRLLNQKDLEKEKKRSSMA---GSSVTSSSAHSHSIRSKKD 919
>AC024876-12|AAF60896.2| 498|Caenorhabditis elegans Hypothetical
protein Y94H6A.1 protein.
Length = 498
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1
Query: 291 CSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRFQRSFLLRTIRLWNELPST 118
CS E F+ + F TA HR+ +EP+ S V + L++ I +++E PST
Sbjct: 332 CSAEWFQELSGLSFEAQTAVHRAISE--IMEPMDSLDVSIEELVLMKFIMMFSE-PST 386
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,183,578
Number of Sequences: 27780
Number of extensions: 403043
Number of successful extensions: 926
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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