Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1175
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     24   4.4  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   4.4  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   4.4  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.7  

>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 522 QTPIQLRTKQIHIQNNVVH*DFSNDVTLW 436
           +TP Q+   ++H   +V + D  ND  LW
Sbjct: 514 KTPRQIAENELHQYLSVENIDLENDPLLW 542


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/63 (22%), Positives = 27/63 (42%)
 Frame = +1

Query: 13  QGDETSQTRQEGAREAGQERSESETQR*PCGAGGGLVPAHDARRHGREAAPAHRHLVGRG 192
           +G ++   R    ++  Q + + + Q  P   GGG +PA  A++  +     H      G
Sbjct: 461 RGPDSGTDRHSEKQQQQQSQHQQQHQHQP---GGGPLPAQSAKQRTKSKPAEHAGGSTTG 517

Query: 193 GRH 201
            +H
Sbjct: 518 DKH 520


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/63 (22%), Positives = 27/63 (42%)
 Frame = +1

Query: 13  QGDETSQTRQEGAREAGQERSESETQR*PCGAGGGLVPAHDARRHGREAAPAHRHLVGRG 192
           +G ++   R    ++  Q + + + Q  P   GGG +PA  A++  +     H      G
Sbjct: 461 RGPDSGTDRHSEKQQQQQSQHQQQHQHQP---GGGPLPAQSAKQRTKSKPAEHAGGSTTG 517

Query: 193 GRH 201
            +H
Sbjct: 518 DKH 520


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 228 LESVRRACGVSSSSSDEMTMRWRGFTPVAPRVMR 127
           + S R +CG S+ S   +T       P++PR  R
Sbjct: 675 MSSARESCGASALSRKLLTESAPPIAPMSPRPNR 708


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,501
Number of Sequences: 2352
Number of extensions: 8534
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)