Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1164
         (504 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       28   0.21 
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    26   0.83 
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        24   3.4  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   3.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.8  

>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 27.9 bits (59), Expect = 0.21
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 268 HIKDEACVTNRIVVGFQILTYSTSLDRTH 182
           HI+ + C    IV GF +L YST   +TH
Sbjct: 15  HIRTDLCT--HIVYGFAVLDYSTLTIKTH 41


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 25.8 bits (54), Expect = 0.83
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 493 PFPVNIPVDRPYPVHIDKHVPVHIEK 416
           P+P+ + V++P  + I K +P  IEK
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEK 222



 Score = 25.4 bits (53), Expect = 1.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 499 AVPFPVNIPVDRPYPVHIDKHVPVHI 422
           AVP  V + + +PYP+ ++   P+ I
Sbjct: 185 AVPHYVKVYIPQPYPLQVNVEQPIKI 210



 Score = 25.0 bits (52), Expect = 1.5
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
 Frame = -3

Query: 502 KAVPFPV----NIPVDRPYPVHIDKHVPVHI 422
           K VP PV     +PV  P P+ +  +V V+I
Sbjct: 164 KTVPVPVFQKVGVPVPHPVPIAVPHYVKVYI 194



 Score = 25.0 bits (52), Expect = 1.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 487 PVNIPVDRPYPVHIDKHVPVHIEK 416
           P+ IP+ +  P  I+K VP  +EK
Sbjct: 207 PIKIPIYKVIPKVIEKPVPYTVEK 230



 Score = 23.0 bits (47), Expect = 5.9
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 472 VDRPYPVHIDKHVPVHIEK 416
           +++P P  ++K  P+ +EK
Sbjct: 220 IEKPVPYTVEKPYPIEVEK 238


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 499 AVPFPVNIPVDRPY 458
           ++PFP N  V+RP+
Sbjct: 206 SIPFPTNATVERPF 219


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 496 VPFPVNIPVDRPYPVHI 446
           VP+P+ IP+  P PV I
Sbjct: 630 VPYPIIIPLPLPIPVPI 646


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 432 GTCLSMWTGYGLST 473
           GTC S+W G  + T
Sbjct: 773 GTCASLWLGNAIQT 786


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,943
Number of Sequences: 2352
Number of extensions: 5542
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)