Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1163
         (339 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    25   0.59 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   1.8  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    22   5.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   7.3  
AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           21   9.6  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           21   9.6  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           21   9.6  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           21   9.6  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    21   9.6  

>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 136 GINVNEHLSQVGGSLSAGSE*FSTTV-LLLYCDTQSCVLAGNIR*DI 273
           G+ +NE  +QV  S  AGSE  STT+   LY   ++  + G +R +I
Sbjct: 295 GLTMNELAAQVFVSFLAGSETSSTTMNFCLYELAKNPDIQGRLREEI 341


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +3

Query: 15  FFKYPQACGWTLVFLLSPVWFPGKNRTTPSHPVDVVRGD 131
           F  YP+     L +  +  W+P   +  P HP  +  G+
Sbjct: 8   FAMYPKNHSGNLPYSATTGWYPSNYQHQPPHPQFIGDGE 46


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 122  YDIHGMRWSGPILTREPHR 66
            + I G+ ++GPI+ +  HR
Sbjct: 1422 FSISGVDYAGPIMVKGTHR 1440


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -1

Query: 147 NIYSLSRLLRHPRDEMEWSYSYPGTTQVI 61
           ++  +S L RHP +   W+    G   V+
Sbjct: 29  DVILVSELYRHPPNNGNWAVDSSGRVAVV 57


>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 180 ECWVRVVQYHRLTLVLRHTILCSRR*YKVRY 272
           E W+ + + HR+T    H +L   + +  +Y
Sbjct: 205 EFWLGLERLHRITAAQIHELLVELKDFSGKY 235


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 180 ECWVRVVQYHRLTLVLRHTILCSRR*YKVRY 272
           E W+ + + HR+T    H +L   + +  +Y
Sbjct: 205 EFWLGLERIHRITAAQIHELLVELKDFSGKY 235


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 180 ECWVRVVQYHRLTLVLRHTILCSRR*YKVRY 272
           E W+ + + HR+T    H +L   + +  +Y
Sbjct: 205 EFWLGLERLHRITAAQIHELLVELKDFSGKY 235


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 180 ECWVRVVQYHRLTLVLRHTILCSRR*YKVRY 272
           E W+ + + HR+T    H +L   + +  +Y
Sbjct: 205 EFWLGLERLHRITAAQIHELLVELKDFSGKY 235


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 280 FSRYLTLYYLR 248
           FSRY T+Y+L+
Sbjct: 103 FSRYTTVYFLK 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,137
Number of Sequences: 2352
Number of extensions: 6662
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)