Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1163
         (339 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075549-1|AAL68356.1|  494|Drosophila melanogaster RH50269p pro...    27   6.2  
AE014134-2849|AAF53614.1|  494|Drosophila melanogaster CG6639-PA...    27   6.2  
BT004870-1|AAO45226.1|  618|Drosophila melanogaster LD38858p pro...    27   8.2  
AE014298-3092|AAN09531.1|  579|Drosophila melanogaster CG15445-P...    27   8.2  
AE014298-3091|AAF50848.2|  618|Drosophila melanogaster CG15445-P...    27   8.2  
AE014298-3090|AAN09530.2|  607|Drosophila melanogaster CG15445-P...    27   8.2  
AE014298-3089|AAN09529.2|  646|Drosophila melanogaster CG15445-P...    27   8.2  

>AY075549-1|AAL68356.1|  494|Drosophila melanogaster RH50269p
           protein.
          Length = 494

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 252 CENTRLCVAIQE*DGGTELLGPS 184
           C NT++C A+    GGT L+ P+
Sbjct: 45  CGNTKICCAVLRKPGGTVLIEPN 67


>AE014134-2849|AAF53614.1|  494|Drosophila melanogaster CG6639-PA
           protein.
          Length = 494

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 252 CENTRLCVAIQE*DGGTELLGPS 184
           C NT++C A+    GGT L+ P+
Sbjct: 45  CGNTKICCAVLRKPGGTVLIEPN 67


>BT004870-1|AAO45226.1|  618|Drosophila melanogaster LD38858p
           protein.
          Length = 618

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 213 DGGTELLGPSTQGSSHLT*MLINIYSLSRLLRHPRDEMEWSYSY 82
           +GG  L GPST  +S  T + +    +  ++ H R E+E   +Y
Sbjct: 540 NGGQNLDGPSTSNASGQTQVALPAPIIEAVINHARVEIETYKAY 583


>AE014298-3092|AAN09531.1|  579|Drosophila melanogaster CG15445-PC,
           isoform C protein.
          Length = 579

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 213 DGGTELLGPSTQGSSHLT*MLINIYSLSRLLRHPRDEMEWSYSY 82
           +GG  L GPST  +S  T + +    +  ++ H R E+E   +Y
Sbjct: 501 NGGQNLDGPSTSNASGQTQVALPAPIIEAVINHARVEIETYKAY 544


>AE014298-3091|AAF50848.2|  618|Drosophila melanogaster CG15445-PA,
           isoform A protein.
          Length = 618

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 213 DGGTELLGPSTQGSSHLT*MLINIYSLSRLLRHPRDEMEWSYSY 82
           +GG  L GPST  +S  T + +    +  ++ H R E+E   +Y
Sbjct: 540 NGGQNLDGPSTSNASGQTQVALPAPIIEAVINHARVEIETYKAY 583


>AE014298-3090|AAN09530.2|  607|Drosophila melanogaster CG15445-PB,
           isoform B protein.
          Length = 607

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 213 DGGTELLGPSTQGSSHLT*MLINIYSLSRLLRHPRDEMEWSYSY 82
           +GG  L GPST  +S  T + +    +  ++ H R E+E   +Y
Sbjct: 529 NGGQNLDGPSTSNASGQTQVALPAPIIEAVINHARVEIETYKAY 572


>AE014298-3089|AAN09529.2|  646|Drosophila melanogaster CG15445-PD,
           isoform D protein.
          Length = 646

 Score = 26.6 bits (56), Expect = 8.2
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 213 DGGTELLGPSTQGSSHLT*MLINIYSLSRLLRHPRDEMEWSYSY 82
           +GG  L GPST  +S  T + +    +  ++ H R E+E   +Y
Sbjct: 568 NGGQNLDGPSTSNASGQTQVALPAPIIEAVINHARVEIETYKAY 611


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,121,576
Number of Sequences: 53049
Number of extensions: 312095
Number of successful extensions: 884
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)