Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1162
         (794 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070617-1|AAL48088.1|  233|Drosophila melanogaster RE71995p pro...    42   7e-04
AE014297-421|AAF51900.1|  233|Drosophila melanogaster CG15592-PA...    42   7e-04
BT009951-1|AAQ22420.1|  295|Drosophila melanogaster RH51767p pro...    34   0.26 
AE014297-425|AAF51897.2|  295|Drosophila melanogaster CG1154-PA ...    34   0.26 
AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro...    29   7.3  
AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-P...    29   7.3  
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P...    29   7.3  

>AY070617-1|AAL48088.1|  233|Drosophila melanogaster RE71995p
           protein.
          Length = 233

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 19/47 (40%), Positives = 32/47 (68%)
 Frame = +1

Query: 100 LPADPEARDAEVNYRLLDGVVNLFETHSIEVKMNPAEKEELQRSLEE 240
           LP + EAR+AEV+  L++ V   F TH+++ K+     +++QR+LEE
Sbjct: 84  LPEEVEAREAEVDSLLVERVARFFGTHTLQFKVPKDSIQDMQRALEE 130


>AE014297-421|AAF51900.1|  233|Drosophila melanogaster CG15592-PA
           protein.
          Length = 233

 Score = 42.3 bits (95), Expect = 7e-04
 Identities = 19/47 (40%), Positives = 32/47 (68%)
 Frame = +1

Query: 100 LPADPEARDAEVNYRLLDGVVNLFETHSIEVKMNPAEKEELQRSLEE 240
           LP + EAR+AEV+  L++ V   F TH+++ K+     +++QR+LEE
Sbjct: 84  LPEEVEAREAEVDSLLVERVARFFGTHTLQFKVPKDSIQDMQRALEE 130


>BT009951-1|AAQ22420.1|  295|Drosophila melanogaster RH51767p
           protein.
          Length = 295

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 100 LPADPEARDAEVNYRLLDGVVNLFETHSIEVKMNPAEKEELQRSLEEG 243
           LP     RDA++   L++ +   F  HS++V       +E+ R LEEG
Sbjct: 112 LPRSGSDRDAKLTNMLIERLSYFFNGHSLQVSFPKLTSDEIGRGLEEG 159


>AE014297-425|AAF51897.2|  295|Drosophila melanogaster CG1154-PA
           protein.
          Length = 295

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 100 LPADPEARDAEVNYRLLDGVVNLFETHSIEVKMNPAEKEELQRSLEEG 243
           LP     RDA++   L++ +   F  HS++V       +E+ R LEEG
Sbjct: 112 LPRSGSDRDAKLTNMLIERLSYFFNGHSLQVSFPKLTSDEIGRGLEEG 159


>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p protein.
          Length = 1688

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 397  CPAFQAKKHYCFTAEIGAVVVPTRA--DLHEVLPP 495
            C   + ++ +CF +  G +  PTRA  + H   PP
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPP 1453


>AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-PA,
            isoform A protein.
          Length = 1537

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 397  CPAFQAKKHYCFTAEIGAVVVPTRA--DLHEVLPP 495
            C   + ++ +CF +  G +  PTRA  + H   PP
Sbjct: 1268 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPP 1302


>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
            isoform B protein.
          Length = 1688

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 397  CPAFQAKKHYCFTAEIGAVVVPTRA--DLHEVLPP 495
            C   + ++ +CF +  G +  PTRA  + H   PP
Sbjct: 1419 CEGVEKRRDFCFNSHKGRIACPTRARVERHSCTPP 1453


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,127,845
Number of Sequences: 53049
Number of extensions: 649387
Number of successful extensions: 2469
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2469
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)