Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1162
         (794 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067624-4|AAM15592.1|  644|Caenorhabditis elegans Hypothetical ...    29   3.8  
AF067624-3|AAM81100.2|  678|Caenorhabditis elegans Hypothetical ...    29   3.8  
AF067624-2|AAC17562.3|  634|Caenorhabditis elegans Hypothetical ...    29   3.8  
U00063-3|AAK18959.2|  446|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclas...    28   8.9  
U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclas...    28   8.9  
AF067212-1|AAC16997.3|  160|Caenorhabditis elegans Hypothetical ...    28   8.9  

>AF067624-4|AAM15592.1|  644|Caenorhabditis elegans Hypothetical
           protein M01B12.4b protein.
          Length = 644

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 73  EPGKPSTEPLPADPEARDAEV 135
           EP +P+TEP+P   E +D E+
Sbjct: 379 EPSEPATEPIPEPNEPKDEEI 399


>AF067624-3|AAM81100.2|  678|Caenorhabditis elegans Hypothetical
           protein M01B12.4c protein.
          Length = 678

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 73  EPGKPSTEPLPADPEARDAEV 135
           EP +P+TEP+P   E +D E+
Sbjct: 369 EPSEPATEPIPEPNEPKDEEI 389


>AF067624-2|AAC17562.3|  634|Caenorhabditis elegans Hypothetical
           protein M01B12.4a protein.
          Length = 634

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 73  EPGKPSTEPLPADPEARDAEV 135
           EP +P+TEP+P   E +D E+
Sbjct: 369 EPSEPATEPIPEPNEPKDEEI 389


>U00063-3|AAK18959.2|  446|Caenorhabditis elegans Hypothetical
           protein F56C9.3 protein.
          Length = 446

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 373 LQLISQGGRRIYVVNVYGLQ*PLNTRW 293
           +QLI    RRI+   VYG++ P+N  W
Sbjct: 219 VQLIISSVRRIHDAAVYGIKDPINVSW 245


>Z81091-5|CAB03142.1|  768|Caenorhabditis elegans Hypothetical
           protein F55H12.1 protein.
          Length = 768

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +2

Query: 290 SPPGVKWLLEPIDIYNVNAPPTLRYKL*DLSIVTTAAPPFKPKSITASRQK 442
           +P   K  + P  +    APPT+R  +   ++ TT APP    + + S  K
Sbjct: 3   TPVSTKKTIAPSTMKTTVAPPTMRTTMAPTTMKTTVAPPTMKTTRSPSTMK 53


>U41109-7|AAQ62450.1| 1045|Caenorhabditis elegans Guanylyl cyclase
            protein 7, isoforma protein.
          Length = 1045

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +1

Query: 40   VNLVDGVFIKGEPGKPSTEPLPADPEARDAEVNYRLLDGVVNLFETH--SIEVKMNPAEK 213
            ++LV   F +    +PS E + +     ++  N  L+D V N+ E++  S+E +++   K
Sbjct: 797  LHLVRDCFTERPSERPSIETVRSQLRGMNSSRNDNLMDHVFNMLESYASSLEEEVSERTK 856

Query: 214  EELQRSLEEGIVYF 255
            E ++   +  ++ +
Sbjct: 857  ELVEEKKKSDVLLY 870


>U41109-6|AAQ62451.1| 1111|Caenorhabditis elegans Guanylyl cyclase
            protein 7, isoformb protein.
          Length = 1111

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +1

Query: 40   VNLVDGVFIKGEPGKPSTEPLPADPEARDAEVNYRLLDGVVNLFETH--SIEVKMNPAEK 213
            ++LV   F +    +PS E + +     ++  N  L+D V N+ E++  S+E +++   K
Sbjct: 797  LHLVRDCFTERPSERPSIETVRSQLRGMNSSRNDNLMDHVFNMLESYASSLEEEVSERTK 856

Query: 214  EELQRSLEEGIVYF 255
            E ++   +  ++ +
Sbjct: 857  ELVEEKKKSDVLLY 870


>AF067212-1|AAC16997.3|  160|Caenorhabditis elegans Hypothetical
           protein F37F2.2 protein.
          Length = 160

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 436 AEIGAVVVPTRADLHEVLPPFGFIGFVERT 525
           ++I AV  PT  ++H+VL   GF   +ERT
Sbjct: 36  SQILAVENPTSVEIHDVLAAVGFNPLLERT 65


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,994,554
Number of Sequences: 27780
Number of extensions: 333908
Number of successful extensions: 892
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)