Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1158
         (802 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    31   0.055
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    26   1.6  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   2.1  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   2.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.8  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 30.7 bits (66), Expect = 0.055
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +2

Query: 86  TANLKLFM--EHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLC 244
           T+N KLF+   HLK H +    KC  C   F  L  L++H   H  T P     C
Sbjct: 135 TSN-KLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHC 188



 Score = 27.9 bits (59), Expect = 0.39
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = +2

Query: 113 HLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCTE 250
           H K H+ +   +C  C    +++ HL+ H + H    P     C +
Sbjct: 345 HAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQ 390



 Score = 25.8 bits (54), Expect = 1.6
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = +2

Query: 107 MEHLK-QHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCT 247
           + H++ +H  +   KC+ C    + L  LK H   H    P   P CT
Sbjct: 199 IRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCT 246



 Score = 24.6 bits (51), Expect = 3.6
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +2

Query: 113 HLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAV 235
           HL  H  +   KC +C   F     LK H   +H   PD V
Sbjct: 373 HLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHN--PDYV 411


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = +2

Query: 350 LPEGMLCRECDAPLDSNKHFLGXXXXXXXXXXXXXYRAQLQHAAVCAGPHCLEDAPRAGP 529
           L  G + REC +P+D  K                   A+++  AVC+GPH +  +    P
Sbjct: 368 LERGHIARECRSPVDRQK---ACIRCGAEGHLAKDCNAEVK-CAVCSGPHRVGHSDCVRP 423

Query: 530 PAHC 541
              C
Sbjct: 424 MLRC 427


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 482 VCAGPHCLEDAPRAGPPAHC 541
           VC GPH +      GPP+ C
Sbjct: 334 VCGGPHRIAAPMCKGPPSQC 353


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 17/65 (26%), Positives = 28/65 (43%)
 Frame = +2

Query: 350 LPEGMLCRECDAPLDSNKHFLGXXXXXXXXXXXXXYRAQLQHAAVCAGPHCLEDAPRAGP 529
           L  G L R+C +P+D  +  +                ++++ AA C GPH +     A P
Sbjct: 394 LERGHLARDCQSPVDRQQACIRCGADGHYAKSCT---SEIKCAA-CNGPHRIGHISCARP 449

Query: 530 PAHCV 544
            A C+
Sbjct: 450 AARCL 454


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 196 PPSTSSHHRAGCCPALH*RTSHHQT*DQGSSAGEGLRQPQ 315
           PPST  HH+A    A H    HH      ++A    ++ Q
Sbjct: 861 PPST--HHQAAAVAAHHHHLQHHAAMVAAAAAAAASQEQQ 898


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,362
Number of Sequences: 2352
Number of extensions: 12738
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)