Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1158
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 36 0.026
U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical pr... 35 0.059
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 33 0.18
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 31 1.3
AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical ... 31 1.3
U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 30 1.7
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 30 1.7
U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila odd-... 30 2.2
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 29 2.9
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 29 2.9
AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical ... 29 2.9
AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ... 29 3.9
AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila od... 29 3.9
Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z50177-6|CAA90547.1| 287|Caenorhabditis elegans Hypothetical pr... 29 5.1
U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical pr... 29 5.1
U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 29 5.1
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL132949-5|CAB61074.1| 144|Caenorhabditis elegans Hypothetical ... 29 5.1
AF099922-4|AAK21409.1| 497|Caenorhabditis elegans Hypothetical ... 29 5.1
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 28 6.8
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 28 6.8
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 28 6.8
AF043700-7|AAB97573.2| 165|Caenorhabditis elegans Hypothetical ... 28 6.8
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 28 6.8
AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal che... 28 6.8
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 28 8.9
U41535-6|AAK67248.1| 482|Caenorhabditis elegans Lin-26 related ... 28 8.9
U41535-5|AAK67252.1| 548|Caenorhabditis elegans Lin-26 related ... 28 8.9
AJ130960-1|CAA10264.1| 482|Caenorhabditis elegans LIR-2B protei... 28 8.9
AJ130959-1|CAA10263.1| 548|Caenorhabditis elegans LIR-2A protei... 28 8.9
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 28 8.9
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 28 8.9
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 28 8.9
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 2 LMFYYKTNLLSSIPFHKTITVYADGYELT--ANLKLFMEHLKQHQKKLDVKCSRCVLRFL 175
L F++K ++L H Y+ GY + A + H++ H K+L C +C RF
Sbjct: 307 LRFHFKKDMLVHERIHTGEKPYSCGYCMKSFAQSQALTAHIRTHTKELPYGCGKCDKRFR 366
Query: 176 NLGHLKDHQVRHHTTVPDAVPL 241
+ L+ H++ HT P P+
Sbjct: 367 DNSCLRKHELAAHTDEPIVRPI 388
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Frame = +2
Query: 113 HLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRH-----HTTVPDAVPLCTEEHL-ITKPK 274
H++QH + KCS C FLN+ +H+ +H H + T + + + +P
Sbjct: 117 HMQQHAHEKPYKCSFCTAEFLNVYEKNEHEEQHMHHPNHGETMEENNATTSQFIQVAEPT 176
Query: 275 TKARP-PVKDCANHNIVETYEQMTLV 349
+A P + +C+ ++YE+ +V
Sbjct: 177 IQAEPCQIYECSEMCGFQSYEEAEVV 202
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/76 (28%), Positives = 30/76 (39%)
Frame = +2
Query: 110 EHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCTEEHLITKPKTKARP 289
EH+++H + CS C + F LK H +H P CT E L K +
Sbjct: 88 EHIRKHTGEKPNVCSICNISFSQAHTLKTHMQQHAHEKPYKCSFCTAEFLNVYEKNEHEE 147
Query: 290 PVKDCANHNIVETYEQ 337
NH ET E+
Sbjct: 148 QHMHHPNHG--ETMEE 161
>U22832-3|AAA64508.2| 359|Caenorhabditis elegans Hypothetical
protein C09F5.3 protein.
Length = 359
Score = 35.1 bits (77), Expect = 0.059
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +2
Query: 86 TANLKLFMEHLKQHQKKLDV-KCSRCVLRFLNLGHLKDH-QVRH--HTTVPDAVPLCTEE 253
T N K F EH KQH ++L + C+ C + + HL H Q+ H T P ++P+ T
Sbjct: 218 TENEKTFKEHSKQHSRQLIMYGCALCATSYPSQLHLITHVQMSHDQETFYPPSLPIPTPP 277
Query: 254 HLITKPKTK 280
+ PK +
Sbjct: 278 SPKSTPKQR 286
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 89 ANLKLFMEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLC 244
+NLK+ H++ H + KC C F L HL+ H + H P +C
Sbjct: 521 SNLKV---HVRTHTGERPFKCEICTKEFTQLAHLQKHHLVHTGERPHRCDIC 569
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 77 YELTANLKLFMEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCTEEH 256
+ T+NLK HL+ H + C C +F HL+ H+ H P + C +++
Sbjct: 573 FSSTSNLKT---HLRLHNGQKPYTCDVCDAKFTQYVHLRLHKRLHANERPYSCGTCGKKY 629
Query: 257 L 259
+
Sbjct: 630 I 630
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 110 EHLKQHQKKLDVKCSRC--VLRFLNLGHLKDHQVRHHTTVPDAVPLCTE 250
E KQ QK+ DVK + +L+FL H +HQ +H DA L +
Sbjct: 256 ELAKQQQKEQDVKNKQQEEILKFLMAQHQLNHQKKHEKKQADAAALAAK 304
>AC025721-2|AAK29901.3| 976|Caenorhabditis elegans Hypothetical
protein Y48G8AL.10 protein.
Length = 976
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 104 FMEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTT 220
++ H+K H K D++C +C F N L H R H+T
Sbjct: 187 YIGHVKVHLKSDDLECEQCGNEFENELDLDHHIRREHST 225
>U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical
protein C10A4.8 protein.
Length = 249
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 113 HLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLC 244
H + H + KC C F G+L H++ H T P LC
Sbjct: 186 HKRIHTGEKPFKCEHCGRAFRQPGNLTRHRLTHTTVKPYVCGLC 229
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 113 HLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCTEEHLITK---PKTKA 283
H+ H K +++C C L F + L+ H +RHH D + + I K P T
Sbjct: 76 HMALHLK--EIQCDNCSLVFQSEKSLQSHIIRHHQEDADELEVWKAPCSICKELFPSTSV 133
Query: 284 RPPVKDCANHNIVETYEQMTLVL 352
+ C N + ++++ +L
Sbjct: 134 KTHEWYCKNREKIIEKQRVSKIL 156
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 113 HLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCTEEHLITK---PKTKA 283
H+ H K +++C C L F + L+ H +RHH D + + I K P T
Sbjct: 194 HMALHLK--EIQCDNCSLVFQSEKSLQSHIIRHHQEDADELEVWKAPCSICKELFPSTSV 251
Query: 284 RPPVKDCANHNIVETYEQMTLVL 352
+ C N + ++++ +L
Sbjct: 252 KTHEWYCKNREKIIEKQRVSKIL 274
>U10438-3|AAA19082.2| 242|Caenorhabditis elegans Drosophila
odd-skipped-like protein1 protein.
Length = 242
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +2
Query: 107 MEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLC 244
M H + H + C C F HL+DH+ H P +C
Sbjct: 144 MIHERTHTNERPFHCETCGKSFRRQDHLRDHKYIHAKEKPHKCEIC 189
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 113 HLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHT 217
H+++H +CS C F HL H RH T
Sbjct: 274 HMRKHTGDKPFRCSLCDRNFARSDHLSLHMKRHST 308
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 113 HLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHT 217
H+++H +CS C F HL H RH T
Sbjct: 280 HMRKHTGDKPFRCSLCDRNFARSDHLSLHMKRHST 314
>AL032641-4|CAA21647.1| 454|Caenorhabditis elegans Hypothetical
protein Y5F2A.4 protein.
Length = 454
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +2
Query: 107 MEHLKQHQKK-LDVK---CSRCVLRFLNLGHLKDHQVRHHTTVP 226
+ HL++HQ L+V+ C+ C +F+ HL H R H+ P
Sbjct: 55 LSHLQRHQMTHLNVRNYSCTFCEEKFVQKSHLTRHVSRKHSNAP 98
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 143 VKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCTEE 253
+KCS C F L HL+ HQ+ H + C E+
Sbjct: 43 LKCSMCDKVFPRLSHLQRHQMTHLNVRNYSCTFCEEK 79
>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
protein Y102A11A.3 protein.
Length = 1571
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 248 EEHLITKPKTKARPPVKDCANHNIVETYEQMTLVLPEGMLCRECDAPLDSNKHF 409
EEH++T+P+T P+ C H + + + V P + + CDA L S+K F
Sbjct: 127 EEHVLTQPETCRVLPLTHCF-HLVKQPSDN---VSPSKLRNKMCDAHLGSSKTF 176
>AC006614-2|AAF39763.1| 254|Caenorhabditis elegans Drosophila
odd-skipped-like protein2 protein.
Length = 254
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +2
Query: 41 PFHKTITVYADGYELTANLKLFMEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTT 220
P + I Y D + T + L + H + H + C C F HL+DH+ H
Sbjct: 120 PKKEFICKYCDRH-FTKSYNLLI-HERTHTDERPYSCDVCGKAFRRQDHLRDHKYIHQKD 177
Query: 221 VPDAVPLC 244
P +C
Sbjct: 178 RPFKCEIC 185
>Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical
protein F53F8.1 protein.
Length = 354
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +2
Query: 113 HLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPD 229
H ++H C C +F HL+ H RH T D
Sbjct: 303 HYRKHTGAKPFACKECSRKFSRSDHLQLHMKRHETDEQD 341
>Z50177-6|CAA90547.1| 287|Caenorhabditis elegans Hypothetical
protein F46G10.3 protein.
Length = 287
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +2
Query: 44 FHKTITVYADGYELTANLKLFMEHLKQHQKKLDVKCSRC 160
FH IT DG L A K+ E H L VKC+ C
Sbjct: 110 FHWLITQNVDGLHLKAGSKMITE---LHGNALQVKCTSC 145
>U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical
protein M03D4.4b protein.
Length = 456
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = +2
Query: 98 KLFMEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLC 244
+L +H H + C C F GHL H + H P P C
Sbjct: 80 QLLKKHWMWHTGERSHVCPHCNKAFFQKGHLTQHLMIHSGGRPHECPQC 128
>U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical
protein M03D4.4a protein.
Length = 505
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = +2
Query: 98 KLFMEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLC 244
+L +H H + C C F GHL H + H P P C
Sbjct: 129 QLLKKHWMWHTGERSHVCPHCNKAFFQKGHLTQHLMIHSGGRPHECPQC 177
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +2
Query: 110 EHLKQHQKKLDVKCSRC--VLRFLNLGHLKDHQVRHHTTVPDAVPLCT 247
EH+K H +C C + +F G L+ H HH+ P C+
Sbjct: 96 EHIKIHDSNR-YQCLECSTITKFGTYGELRAHHKLHHSKASHKCPQCS 142
>AL132949-5|CAB61074.1| 144|Caenorhabditis elegans Hypothetical
protein Y53F4B.5 protein.
Length = 144
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +2
Query: 107 MEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTV--PDAVPLCTEEHLITKPKT 277
+EH+ +H KK C C F + + HQ H + P EE + + ++
Sbjct: 53 LEHIVKHVKKYPFNCPYCRRLFASQKEVDGHQENRHAELDWKSVEPFAEEEQIYRRSRS 111
>AF099922-4|AAK21409.1| 497|Caenorhabditis elegans Hypothetical
protein F56F11.3 protein.
Length = 497
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 113 HLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRH 211
H ++H KCS+C F HL H RH
Sbjct: 464 HYRKHTGDRPFKCSQCSRAFSRSDHLSLHMKRH 496
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 453 HDVENEHFEHVVFPRKCLLLSSGASHSRQ-SMPSGSTS-VICSYVSTMLWLAQSFTGGR 283
H ++NE F H+++ ++ LL H R+ S+P+ S S V+ + +S ++A + G R
Sbjct: 319 HYIDNETFNHLIYLQR--LLQQCMKHCRELSIPNNSISQVVPAIMSIRNFIASNSMGYR 375
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 453 HDVENEHFEHVVFPRKCLLLSSGASHSRQ-SMPSGSTS-VICSYVSTMLWLAQSFTGGR 283
H ++NE F H+++ ++ LL H R+ S+P+ S S V+ + +S ++A + G R
Sbjct: 319 HYIDNETFNHLIYLQR--LLQQCMKHCRELSIPNNSISQVVPAIMSIRNFIASNSMGYR 375
>Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical
protein F37D6.2c protein.
Length = 584
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 104 FMEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHT 217
F+ H++ H ++C C L F + L+ H+ HT
Sbjct: 358 FVNHMRSHALGPQMRCHVCALTFTSRLLLEAHRTNDHT 395
>Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical
protein F37D6.2b protein.
Length = 581
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 104 FMEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHT 217
F+ H++ H ++C C L F + L+ H+ HT
Sbjct: 355 FVNHMRSHALGPQMRCHVCALTFTSRLLLEAHRTNDHT 392
>Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical
protein F37D6.2a protein.
Length = 582
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 104 FMEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHT 217
F+ H++ H ++C C L F + L+ H+ HT
Sbjct: 356 FVNHMRSHALGPQMRCHVCALTFTSRLLLEAHRTNDHT 393
>Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical
protein T22C8.5 protein.
Length = 166
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +2
Query: 107 MEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTV 223
+ H + H K+ C C+ +F HL+ H H V
Sbjct: 125 IRHKRTHTKEYRFACKFCIRQFSRSDHLQQHLTSVHNIV 163
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 453 HDVENEHFEHVVFPRKCLLLSSGASHSRQ-SMPSGSTS-VICSYVSTMLWLAQSFTGGR 283
H ++NE F H+++ ++ LL H R+ S+P+ S S V+ + +S ++A + G R
Sbjct: 319 HYIDNETFNHLIYLQR--LLQQCMKHCRELSIPNNSISQVVPAIMSIRNFIASNSMGYR 375
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 453 HDVENEHFEHVVFPRKCLLLSSGASHSRQ-SMPSGSTS-VICSYVSTMLWLAQSFTGGR 283
H ++NE F H+++ ++ LL H R+ S+P+ S S V+ + +S ++A + G R
Sbjct: 319 HYIDNETFNHLIYLQR--LLQQCMKHCRELSIPNNSISQVVPAIMSIRNFIASNSMGYR 375
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = -2
Query: 453 HDVENEHFEHVVFPRKCLLLSSGASHSRQ-SMPSGSTS-VICSYVSTMLWLAQSFTGGR 283
H ++NE F H+++ ++ LL H R+ S+P+ S S V+ + +S ++A + G R
Sbjct: 319 HYIDNETFNHLIYLQR--LLQQCMKHCRELSIPNNSISQVVPAIMSIRNFIASNSMGYR 375
>AF043700-7|AAB97573.2| 165|Caenorhabditis elegans Hypothetical
protein K09H9.7 protein.
Length = 165
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +2
Query: 110 EHLKQHQKKLDVKCSRCVLRF----LNLGHLKDHQVRHHTTVPD 229
+H+KQH +K CS C RF L HL H+ R + + D
Sbjct: 99 KHMKQHVEKTRYSCSTCSGRFETEEAGLHHLLIHRRRRNVKLFD 142
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 110 EHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRH 211
+HL+ H CS C+++F G+L H H
Sbjct: 239 KHLRTHTGHKPYVCSICMMKFTQSGNLHRHMKTH 272
>AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform a protein.
Length = 214
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 110 EHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRH 211
+HL+ H CS C+++F G+L H H
Sbjct: 180 KHLRTHTGHKPYVCSICMMKFTQSGNLHRHMKTH 213
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/48 (27%), Positives = 17/48 (35%)
Frame = +2
Query: 101 LFMEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLC 244
+ H++ H C C F HL H H P A P+C
Sbjct: 383 MLTRHMRLHTGAKPYSCPTCNQVFSRSDHLSTHLRTHTGEKPYACPMC 430
>U41535-6|AAK67248.1| 482|Caenorhabditis elegans Lin-26 related
protein 2, isoform b protein.
Length = 482
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 104 FMEH-LKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCTEE 253
F EH + +H KCS+C + + +K H H + + V + T E
Sbjct: 408 FFEHVMMKHSTHKPFKCSQCPYQAVRKVRVKQHGQSQHNSEHEPVNMITPE 458
>U41535-5|AAK67252.1| 548|Caenorhabditis elegans Lin-26 related
protein 2, isoform a protein.
Length = 548
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 104 FMEH-LKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCTEE 253
F EH + +H KCS+C + + +K H H + + V + T E
Sbjct: 474 FFEHVMMKHSTHKPFKCSQCPYQAVRKVRVKQHGQSQHNSEHEPVNMITPE 524
>AJ130960-1|CAA10264.1| 482|Caenorhabditis elegans LIR-2B protein
protein.
Length = 482
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 104 FMEH-LKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCTEE 253
F EH + +H KCS+C + + +K H H + + V + T E
Sbjct: 408 FFEHVMMKHSTHKPFKCSQCPYQAVRKVRVKQHGQSQHNSEHEPVNMITPE 458
>AJ130959-1|CAA10263.1| 548|Caenorhabditis elegans LIR-2A protein
protein.
Length = 548
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 104 FMEH-LKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTTVPDAVPLCTEE 253
F EH + +H KCS+C + + +K H H + + V + T E
Sbjct: 474 FFEHVMMKHSTHKPFKCSQCPYQAVRKVRVKQHGQSQHNSEHEPVNMITPE 524
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 107 MEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTT 220
+ H + H ++ KC +C LK+H ++HH +
Sbjct: 640 VRHERIHLEEKPFKCDQCEYASSRRDKLKEHIIKHHNS 677
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 107 MEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTT 220
+ H + H ++ KC +C LK+H ++HH +
Sbjct: 640 VRHERIHLEEKPFKCDQCEYASSRRDKLKEHIIKHHNS 677
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 107 MEHLKQHQKKLDVKCSRCVLRFLNLGHLKDHQVRHHTT 220
+ H + H ++ KC +C LK+H ++HH +
Sbjct: 640 VRHERIHLEEKPFKCDQCEYASSRRDKLKEHIIKHHNS 677
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,163,993
Number of Sequences: 27780
Number of extensions: 259900
Number of successful extensions: 1128
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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