Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1154
         (680 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ628247-1|CAF31639.1|  221|Homo sapiens keratin associated prot...    32   2.2  
AB126074-1|BAD20201.1|  221|Homo sapiens keratin associated prot...    32   2.2  
AJ628245-1|CAF31637.1|  177|Homo sapiens keratin associated prot...    31   3.8  
AB126071-1|BAD20198.1|  177|Homo sapiens keratin associated prot...    31   3.8  
BC006562-1|AAH06562.2|  377|Homo sapiens MICAL3 protein protein.       31   5.0  
AB020626-1|BAA74842.1|  989|Homo sapiens KIAA0819 protein protein.     31   5.0  
AY360461-1|AAQ62965.1|  187|Homo sapiens UHS KERB-like protein p...    30   6.6  
AB126070-1|BAD20197.1|  278|Homo sapiens keratin associated prot...    30   6.6  
AY597812-1|AAT09005.1|  238|Homo sapiens UHS KerB-like protein.        30   8.8  
AB126080-1|BAD20207.1|  156|Homo sapiens keratin associated prot...    30   8.8  
AB126072-1|BAD20199.1|  238|Homo sapiens keratin associated prot...    30   8.8  

>AJ628247-1|CAF31639.1|  221|Homo sapiens keratin associated protein
           5-11 protein.
          Length = 221

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
 Frame = -3

Query: 468 CMSVTGYRGSVC--LSHQRSGMGIGCVRGGVSNRGCV-----CGISCEWCSMRSISCNRC 310
           C   +G  GS C  L     G G GC   G    GC      CG  C  C      C  C
Sbjct: 3   CCGCSGGCGSGCGGLGSGCGGCGSGCGGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGC 62

Query: 309 GSG 301
           GSG
Sbjct: 63  GSG 65



 Score = 29.9 bits (64), Expect = 8.8
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
 Frame = -3

Query: 468 CMSVTGYRGSVCLSHQRSGMGIGCVRGGVSNRGCVCGISC---EWCSMRSISCNRCGSG 301
           C S  G  GS C      G G GC   G    GC   + C     C + + SC+ CG G
Sbjct: 38  CGSGCGGCGSGC-----GGCGSGCGGCGGCGSGCCVPVCCCKPMCCCVPACSCSSCGKG 91


>AB126074-1|BAD20201.1|  221|Homo sapiens keratin associated protein
           protein.
          Length = 221

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
 Frame = -3

Query: 468 CMSVTGYRGSVC--LSHQRSGMGIGCVRGGVSNRGCV-----CGISCEWCSMRSISCNRC 310
           C   +G  GS C  L     G G GC   G    GC      CG  C  C      C  C
Sbjct: 3   CCGCSGGCGSGCGGLGSGCGGCGSGCGGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGC 62

Query: 309 GSG 301
           GSG
Sbjct: 63  GSG 65



 Score = 29.9 bits (64), Expect = 8.8
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
 Frame = -3

Query: 468 CMSVTGYRGSVCLSHQRSGMGIGCVRGGVSNRGCVCGISC---EWCSMRSISCNRCGSG 301
           C S  G  GS C      G G GC   G    GC   + C     C + + SC+ CG G
Sbjct: 38  CGSGCGGCGSGC-----GGCGSGCGGCGGCGSGCCVPVCCCKPMCCCVPACSCSSCGKG 91


>AJ628245-1|CAF31637.1|  177|Homo sapiens keratin associated protein
           5-8 protein.
          Length = 177

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 23/57 (40%), Positives = 24/57 (42%)
 Frame = -3

Query: 474 RSCMSVTGYRGSVCLSHQRSGMGIGCVRGGVSNRGCVCGISCEWCSMRSISCNRCGS 304
           R C S  G  GS C      G G GC  GG  +    CG  C  CS    SC  CGS
Sbjct: 8   RGCGSGCGGCGSSC-----GGCGSGC--GGCGSGRGGCGSGCGGCSS---SCGGCGS 54


>AB126071-1|BAD20198.1|  177|Homo sapiens keratin associated protein
           protein.
          Length = 177

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 23/57 (40%), Positives = 24/57 (42%)
 Frame = -3

Query: 474 RSCMSVTGYRGSVCLSHQRSGMGIGCVRGGVSNRGCVCGISCEWCSMRSISCNRCGS 304
           R C S  G  GS C      G G GC  GG  +    CG  C  CS    SC  CGS
Sbjct: 8   RGCGSGCGGCGSSC-----GGCGSGC--GGCGSGRGGCGSGCGGCSS---SCGGCGS 54


>BC006562-1|AAH06562.2|  377|Homo sapiens MICAL3 protein protein.
          Length = 377

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 14/45 (31%), Positives = 29/45 (64%)
 Frame = -2

Query: 415 RHGHRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 281
           R   +  + ++KQ+ L+  H+ +++Q    +LQQV +R++ L+ER
Sbjct: 205 RRVQKAARRQAKQEELKRLHRAQIIQR---QLQQVEERQRRLEER 246


>AB020626-1|BAA74842.1|  989|Homo sapiens KIAA0819 protein protein.
          Length = 989

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 14/45 (31%), Positives = 29/45 (64%)
 Frame = -2

Query: 415 RHGHRLCKGRSKQQGLRVRHKLRVVQHAQHKLQQVRQRRKSLQER 281
           R   +  + ++KQ+ L+  H+ +++Q    +LQQV +R++ L+ER
Sbjct: 817 RRVQKAARRQAKQEELKRLHRAQIIQR---QLQQVEERQRRLEER 858


>AY360461-1|AAQ62965.1|  187|Homo sapiens UHS KERB-like protein
           protein.
          Length = 187

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = -3

Query: 468 CMSVTGYRGSVCLSHQRSGMGIGCVRGGVSNRGCVCGISCEWCSMRSISCNRCGS 304
           C   +G  GS C      G G GC   G S R  +C      C + + SC+ CGS
Sbjct: 3   CCGCSGGCGSGC-----GGCGSGCGGCGSSCRVPICCCKPVCCCVPACSCSSCGS 52


>AB126070-1|BAD20197.1|  278|Homo sapiens keratin associated protein
           protein.
          Length = 278

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
 Frame = -3

Query: 468 CMSVTGYRGSV-CLSHQRSGMGIGCVRGGVSNRGCVCGISCE--WCSMRSISCNRCGSG 301
           C S  G +G        + G G GC  GG  +  CV    C+   C + + SC+ CG G
Sbjct: 99  CGSCGGSKGGCGSCGGSKGGCGSGC--GGCGSSCCVPVCCCKPMCCCVPACSCSSCGKG 155


>AY597812-1|AAT09005.1|  238|Homo sapiens UHS KerB-like protein.
          Length = 238

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -3

Query: 468 CMSVTGYRGSVCLSHQRSGMGIGCVRGGVSNRGCVCGISCE--WCSMRSISCNRCGS 304
           C   +G  GS C     S  G G   GG  +  CV    C+   C + + SC+ CGS
Sbjct: 3   CCGCSGGCGSSCGGCGSSCGGCGSGYGGCGSGCCVPVCCCKPVCCCVPACSCSSCGS 59


>AB126080-1|BAD20207.1|  156|Homo sapiens keratin associated protein
           protein.
          Length = 156

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
 Frame = -3

Query: 468 CMSVTGYRGSVC--LSHQRSGMGIGCVRGGVSNRGCVCGISCE--WCSMRSISCNRCGS- 304
           C   +G  GS C        G G GC  GG  +  CV    C+   C + + SC+ CGS 
Sbjct: 3   CCGCSGGCGSGCGGCGSGSGGCGSGC--GGCGSSCCVPICCCKPVCCCVPACSCSSCGSC 60

Query: 303 GVSRYRSDSFGEER 262
           G S+    S G  +
Sbjct: 61  GGSKGGCGSCGSSK 74


>AB126072-1|BAD20199.1|  238|Homo sapiens keratin associated protein
           protein.
          Length = 238

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -3

Query: 468 CMSVTGYRGSVCLSHQRSGMGIGCVRGGVSNRGCVCGISCE--WCSMRSISCNRCGS 304
           C   +G  GS C     S  G G   GG  +  CV    C+   C + + SC+ CGS
Sbjct: 3   CSGCSGGCGSSCGGCGSSCGGCGSGYGGCGSGCCVPVCCCKPVCCCVPACSCSSCGS 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,335,454
Number of Sequences: 237096
Number of extensions: 728480
Number of successful extensions: 2490
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2485
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)