Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1153
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    28   0.27 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.5  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   3.3  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   5.8  

>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 154 RLGPYYFLLPF*GDEHTAYLMDGDVMDVGN 65
           R GPY F +P   DEH  +L   D    GN
Sbjct: 376 RFGPYAFRIPDENDEHGIWLSYEDPESAGN 405


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 24  EYLRIGSNLALPLTLPTSMTSPSI 95
           EY  +G+ +ALP  +  +  SPSI
Sbjct: 171 EYTFVGNGVALPSIVDVAFASPSI 194


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 425 KTLYPFLRKLRGRRSMKFPTLIENVEK 505
           K L P+L +L     MK PT++ N+EK
Sbjct: 134 KGLAPYLAELE---KMKIPTVVANLEK 157


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 154 RLGPYYFLLPF*GDEHTAYLMDGDVMDVGNVRGKAK 47
           R G Y F LP    EH  ++   D    GN  G  K
Sbjct: 368 RFGSYAFRLPDSNGEHGVWVSYEDPDTAGNKAGYVK 403


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,237
Number of Sequences: 2352
Number of extensions: 11628
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)