Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1150
         (439 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91868-1|CAA62974.1|  284|Homo sapiens six1 protein.                   34   0.25 
BT007083-1|AAP35746.1|  284|Homo sapiens sine oculis homeobox ho...    34   0.25 
BC008874-1|AAH08874.1|  284|Homo sapiens sine oculis homeobox ho...    34   0.25 
AF323497-1|AAK06772.1|  284|Homo sapiens SIX1 protein.                 34   0.25 

>X91868-1|CAA62974.1|  284|Homo sapiens six1 protein.
          Length = 284

 Score = 33.9 bits (74), Expect = 0.25
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = -1

Query: 388 SVYTVPILTHTTKNHSLFTHRHRVYPSLLDTMFSSIHRLSS 266
           S Y++P LT +  +H L TH+H++  SLL  + SS+  L S
Sbjct: 244 SNYSLPGLTASQPSHGLQTHQHQLQDSLLGPLTSSLVDLGS 284


>BT007083-1|AAP35746.1|  284|Homo sapiens sine oculis homeobox
           homolog 1 (Drosophila) protein.
          Length = 284

 Score = 33.9 bits (74), Expect = 0.25
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = -1

Query: 388 SVYTVPILTHTTKNHSLFTHRHRVYPSLLDTMFSSIHRLSS 266
           S Y++P LT +  +H L TH+H++  SLL  + SS+  L S
Sbjct: 244 SNYSLPGLTASQPSHGLQTHQHQLQDSLLGPLTSSLVDLGS 284


>BC008874-1|AAH08874.1|  284|Homo sapiens sine oculis homeobox
           homolog 1 (Drosophila) protein.
          Length = 284

 Score = 33.9 bits (74), Expect = 0.25
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = -1

Query: 388 SVYTVPILTHTTKNHSLFTHRHRVYPSLLDTMFSSIHRLSS 266
           S Y++P LT +  +H L TH+H++  SLL  + SS+  L S
Sbjct: 244 SNYSLPGLTASQPSHGLQTHQHQLQDSLLGPLTSSLVDLGS 284


>AF323497-1|AAK06772.1|  284|Homo sapiens SIX1 protein.
          Length = 284

 Score = 33.9 bits (74), Expect = 0.25
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = -1

Query: 388 SVYTVPILTHTTKNHSLFTHRHRVYPSLLDTMFSSIHRLSS 266
           S Y++P LT +  +H L TH+H++  SLL  + SS+  L S
Sbjct: 244 SNYSLPGLTASQPSHGLQTHQHQLQDSLLGPLTSSLVDLGS 284


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,769,045
Number of Sequences: 237096
Number of extensions: 1155605
Number of successful extensions: 2051
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2051
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)