Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1150
         (439 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   1.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   4.5  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.9  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 91  GSNLMTVPTRTLARAMLRRIYHRIGNATY*EDPARN 198
           G + +  P+R   + + RR Y+ +G  +  ED  +N
Sbjct: 537 GKDELGKPSRISKQGLFRRFYNLLGKLSTIEDADKN 572


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 143 AESTTGSETRPTEKIRRETQ 202
           A  TTG+ T PT ++R+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -1

Query: 304 LDTMFSSIHRLSSSSNPSLATKGSTSKLTLRHSPLSFS 191
           LD+M + I   + S N   +  GST     +H+   F+
Sbjct: 359 LDSMNAVIRNFNESENRRNSCLGSTETYYSKHNTQQFT 396


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 25  PT*SDSLERPYQRRLN**VSSRGSNLM 105
           P   D   RP+++RL+  +  R  NL+
Sbjct: 95  PDSRDYFSRPFEKRLHSRLPGRNFNLL 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,241
Number of Sequences: 438
Number of extensions: 2197
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)