Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1147
(599 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 116 2e-26
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 102 2e-22
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 81 8e-16
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 54 6e-08
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 48 5e-06
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 39 0.002
AF036688-4|AAB88313.1| 233|Caenorhabditis elegans Hypothetical ... 29 1.9
AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like ... 29 1.9
AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical ... 29 3.3
U80440-2|AAK21469.1| 162|Caenorhabditis elegans Hypothetical pr... 27 7.7
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 116 bits (278), Expect = 2e-26
Identities = 60/181 (33%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
Frame = +3
Query: 9 FRVKFGEHDRCDRSHTPETRYVVKVIVHNFNLKELSNDISLIQLSRP-IGYSHAIRPVCL 185
+ V G+ D + Y+ ++ + S+DI+++++ P I ++ +P+CL
Sbjct: 80 YEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICL 139
Query: 186 PKTPDSLYT-GAEAIVAGWGATGETGNWSCMLLKAELPILSNEECQGTSYNSSKIKNTMM 362
P + D +YT G + +V+GWG+ G ++ L A +PI++ +C +S S + +
Sbjct: 140 P-SKDFVYTPGRQCVVSGWGSMGL--RYAERLQAALIPIINRFDCVNSSQIYSSMSRSAF 196
Query: 363 CAGYPATAHKDACTGDSGGPLVVENERNVYELIGIVSWGYGCARKGYPGVYTRVTKYLDW 542
CAGY D+C GDSGGP E + L G++SWG GCA+K PG+YT V YL W
Sbjct: 197 CAGY-LEGGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSW 255
Query: 543 I 545
I
Sbjct: 256 I 256
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 102 bits (245), Expect = 2e-22
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 4/183 (2%)
Frame = +3
Query: 9 FRVKFGEHDRCDRSHTPETRYVVKVIVHN-FNLKELSN-DISLIQLSRPIGYSHAIRPVC 182
+ V+ G H RS + V V +H +N+ S+ D +++++ P+ S RP+C
Sbjct: 110 YSVRVGGH----RSGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPIC 165
Query: 183 LPKTPDSLYTGAEAIVAGWGATGETGNWSCMLLKA-ELPILSNEECQGTSYNSSKIK-NT 356
LP P +V GWG+T E + S L+ +P+LS C +I +
Sbjct: 166 LPSLP--AVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPS 223
Query: 357 MMCAGYPATAHKDACTGDSGGPLVVENERNVYELIGIVSWGYGCARKGYPGVYTRVTKYL 536
M+CAGY + D+C GDSGGPL+ + + +EL G+VSWG GCAR G PGVY V
Sbjct: 224 MLCAGY-SYGKIDSCQGDSGGPLMCARDGH-WELTGVVSWGIGCARPGMPGVYGNVHSAS 281
Query: 537 DWI 545
WI
Sbjct: 282 TWI 284
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 80.6 bits (190), Expect = 8e-16
Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 18/177 (10%)
Frame = +3
Query: 72 VVKVIVHN-FNLKELSNDISLIQLSRPIGYSHAIRPVCLPKTPDSLYTGAE-AIVAGWGA 245
V + +H+ +N + NDI+L+++S + I+PVCL L + +V G+G
Sbjct: 107 VKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPVCLVHDDSKLLKQYKNGVVIGYGL 165
Query: 246 T-GETGNWSCMLLKAE------LPILSNEECQGT----SYNSSKIKNTMMCAGYPATAHK 392
T GE + L+ ++ +PI+S+++C T S S KI +CAG A H
Sbjct: 166 TLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAG--AYLHG 223
Query: 393 DACTGDSGGPLVVENERNVYELIGIVSWGY----GCARKG-YPGVYTRVTKYLDWIR 548
A GDSGGPL++ Y IGI S+G G +G +PGVYTR++KY+ WI+
Sbjct: 224 TA-PGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYVPWIQ 279
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 54.4 bits (125), Expect = 6e-08
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 8/193 (4%)
Frame = +3
Query: 18 KFGEHDRCDRSHTPETRYVVKVIVHNFNLKEL--SNDISLIQLSRPIGYSHAIRPVCLPK 191
K+ RC +S + ++ F +D +++++ + I +S +RP+CLP+
Sbjct: 108 KYPNDPRCKKSDVIHNKVRAVLVDGEFASSNCLKGHDWAIVEVEKRIHFSENVRPICLPR 167
Query: 192 TPDSLYTGAEAIVAGWGAT-GETGNWSCMLLKAELPILSNEECQGT-SYNSSKIKNTMMC 365
P+ YT + A V GWG E+G L E+P+ + +C+ S + +C
Sbjct: 168 -PNMYYTKSLA-VPGWGRIFNESGP-----LIHEIPMRIDRDCKRPWSDRLPADADDFIC 220
Query: 366 AGYPATAHKDA---CTGDSGGPLVVENER-NVYELIGIVSWGYGCARKGYPGVYTRVTKY 533
A ++ A C GDSGG L ++ LI I S+G +TRV Y
Sbjct: 221 ATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAFLIAITSFGTRGCPSNMLARFTRVDMY 280
Query: 534 LDWIRDNTDGACY 572
L+ I + T G CY
Sbjct: 281 LNLICNYT-GVCY 292
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 48.0 bits (109), Expect = 5e-06
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 3/132 (2%)
Frame = +3
Query: 108 ELSNDISLIQLSRPIGYSHAIRPVCLPKTPD-SLYTGAEAIVAGWGATGETGNWSCMLLK 284
E NDI +++L I CLP P+ ++ +GA GWG+ G +
Sbjct: 173 EQGNDIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTSFGWGSDPGKGFDNAAFPM 232
Query: 285 AELPILSNEECQGTSYN-SSKIKNTMMCAGYPATAHKDACTGDSGGPLVVENERNVYE-L 458
++ L+ E N + I C K+ C+GDSGG L + E +
Sbjct: 233 IQVLTLATETLATCEENWGTSIPFDSFCTA--EEEDKNVCSGDSGGGLTFHQSDSAREFI 290
Query: 459 IGIVSWGYGCAR 494
I IVS+G C +
Sbjct: 291 IAIVSYGSDCVQ 302
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 39.1 bits (87), Expect = 0.002
Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Frame = +3
Query: 105 KELSNDISLIQLSRPIGYSHAIRPVCL---PKTPDSLYTGAEAIVAGWGATGETGNWSCM 275
+E NDI++ +L PI +S I P CL PK P TG + + G+G
Sbjct: 117 RESFNDIAVFELEEPIEFSKDIFPACLPSAPKIPRIRETGYK--LFGYGRDPSDSVLESG 174
Query: 276 LLKAELPILSNEECQGTSYNSSKIKNTMMCAGYPATAHKDACTGDSGGPLV-VENERNVY 452
LK+ ++ EC + + C A +C GDSG +V + RNV
Sbjct: 175 KLKSLYSFVA--EC-----SDDFPYGGVYCTS--AVNRGLSCDGDSGSGVVRTSDTRNVQ 225
Query: 453 ELIGIVSWGYGC 488
L+G++S G C
Sbjct: 226 VLVGVLSAGMPC 237
>AF036688-4|AAB88313.1| 233|Caenorhabditis elegans Hypothetical
protein C24D10.4 protein.
Length = 233
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 274 MQDQFPVSPVAPHPATIASAPVYKLSGVLGRHTGRM 167
M DQ +PVAP P T +L+ +LG GR+
Sbjct: 1 MSDQEETAPVAPPPLTAEERRQRRLAKILGNSEGRI 36
>AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like
protein protein.
Length = 605
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 363 CAGYPATAHKDACTGDSGGPLVVENERNVY 452
C G +K+ TGD+ GPL+V++E+N+Y
Sbjct: 109 CDGSHGKHNKE--TGDNVGPLIVKSEKNLY 136
>AF078157-5|AAN84817.1| 379|Caenorhabditis elegans Hypothetical
protein F25E5.7 protein.
Length = 379
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 42 DRSHTPETR----YVVKVIVHNFNLKELSNDISLIQLSRPIGYSHAIRPVCLPKTPDSLY 209
DRS TR V +VIV N S + +++L +P+ + +I PVC+ P
Sbjct: 135 DRSKFDMTRKFQDLVRRVIVINGCPDVNSAKVLILELKKPLELNPSIWPVCISNDPQLFD 194
Query: 210 TGAEAIVAGWGATG 251
++ V+G A G
Sbjct: 195 RSSDFSVSGIDAKG 208
>U80440-2|AAK21469.1| 162|Caenorhabditis elegans Hypothetical
protein T21E12.3 protein.
Length = 162
Score = 27.5 bits (58), Expect = 7.7
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +3
Query: 171 RPVCLPKTPDSLYTGAEAI-VAGWGATGETGNWSCMLLKAELPILSNEECQGTSYNSSKI 347
R +C+ +L+ + + G+G GN S L++E + E+C T+ +
Sbjct: 6 RFICVNHEDSNLFNENNRMQLFGFGIDPSAGNQSAGPLRSET--VKAEKCFTTTGKAFCT 63
Query: 348 KNTMMCAGYPATAHKDACTGDSGGPLV-VENERNVYELIGIVSWGYGC 488
K+ + ++ ACTGDSGG +V + N+R ++G++ G C
Sbjct: 64 KSI--------SKNQLACTGDSGGGVVQLINDR--VTVVGVIYEGVTC 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,762,070
Number of Sequences: 27780
Number of extensions: 290134
Number of successful extensions: 718
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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