Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1145
         (648 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY874862-1|AAX59898.1|  424|Homo sapiens SH3-binding kinase prot...    32   1.5  
BC031482-1|AAH31482.1|  989|Homo sapiens C10orf12 protein protein.     32   2.0  
BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open read...    32   2.0  
AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open read...    32   2.0  
AK023084-1|BAB14396.1|  914|Homo sapiens protein ( Homo sapiens ...    32   2.0  
AB062450-1|BAB85632.1|  302|Homo sapiens NEK7 protein.                 30   6.2  
U93867-1|AAB63675.1|  533|Homo sapiens RNA polymerase III subuni...    30   8.2  

>AY874862-1|AAX59898.1|  424|Homo sapiens SH3-binding kinase
           protein.
          Length = 424

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -3

Query: 172 PLDTMRRCHRSKFSALPSLIGRRLRHYSLRPQRILL 65
           P DT++RC +    AL  + GR+L H  ++P+ +LL
Sbjct: 147 PEDTVKRCVQQLGLALDFMHGRQLVHRDIKPENVLL 182


>BC031482-1|AAH31482.1|  989|Homo sapiens C10orf12 protein protein.
          Length = 989

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 248 VKAPLDQPGPSSLYPTSLEPGRIK 319
           VK PL +  PSSLYP+SL+  R+K
Sbjct: 737 VKHPLQKYAPSSLYPSSLQAERLK 760


>BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open reading
           frame 12 protein.
          Length = 1247

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 248 VKAPLDQPGPSSLYPTSLEPGRIK 319
           VK PL +  PSSLYP+SL+  R+K
Sbjct: 903 VKHPLQKYAPSSLYPSSLQAERLK 926


>AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open reading
           frame 12 protein.
          Length = 1247

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 248 VKAPLDQPGPSSLYPTSLEPGRIK 319
           VK PL +  PSSLYP+SL+  R+K
Sbjct: 903 VKHPLQKYAPSSLYPSSLQAERLK 926


>AK023084-1|BAB14396.1|  914|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13022 fis, clone NT2RP3000753, weakly similar to
           NEUROFILAMENT TRIPLET H PROTEIN. ).
          Length = 914

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 248 VKAPLDQPGPSSLYPTSLEPGRIK 319
           VK PL +  PSSLYP+SL+  R+K
Sbjct: 570 VKHPLQKYAPSSLYPSSLQAERLK 593


>AB062450-1|BAB85632.1|  302|Homo sapiens NEK7 protein.
          Length = 302

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = -3

Query: 202 RHFPRIAKLFPLDTMRRCHRSKFSALPSLIGRRLRHYSLRPQRILLTPPG 53
           +HF +  +L P  T+ +      SAL  +  RR+ H  ++P  + +T  G
Sbjct: 124 KHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG 173


>U93867-1|AAB63675.1|  533|Homo sapiens RNA polymerase III subunit
           protein.
          Length = 533

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +1

Query: 199 VSNSRELNLIDGVSLIGQGSPRSARSFEPLPDEPRARENQV 321
           V N +++ L+  +SLIG+G  R + S E    EP+AR+  +
Sbjct: 181 VINEKDMYLVPKLSLIGKGKRRRS-SDEDAAGEPKARDQNI 220


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.135    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,069,750
Number of Sequences: 237096
Number of extensions: 1773586
Number of successful extensions: 4681
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4681
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)