Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1133
         (809 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1121 + 34262019-34262040,34262144-34262211,34262909-342630...    32   0.62 
05_07_0328 + 29286109-29286120,29286982-29287146,29288427-292885...    30   1.9  
08_01_0713 - 6307737-6308789,6308886-6309056                           29   4.4  
10_02_0078 - 4992019-4992594,4993156-4993248,4995984-4996202,499...    29   5.8  
03_02_0377 - 7898075-7898605,7900782-7901000,7901079-7901142,790...    29   5.8  

>02_05_1121 +
           34262019-34262040,34262144-34262211,34262909-34263067,
           34263146-34263313,34264125-34264278,34264845-34264924,
           34265567-34265839,34265956-34266099,34266750-34266884,
           34266994-34267092,34267530-34267586,34267673-34267877,
           34268159-34268277,34268779-34268877,34268964-34269203
          Length = 673

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -2

Query: 718 FEFLLVELGVGCSSPSGPLLVNVVHQVL 635
           FE LL +L + CSSP  P+L NV+H V+
Sbjct: 313 FEKLLRDLDIICSSPLDPVLENVLHFVV 340


>05_07_0328 + 29286109-29286120,29286982-29287146,29288427-29288589,
            29288625-29288903,29289047-29289122,29289725-29289787,
            29292116-29292164,29292413-29292504,29293017-29293068,
            29293209-29293271,29293382-29293431,29293941-29294016,
            29294444-29294656,29294763-29294869,29294966-29295074,
            29295489-29295689,29295773-29296033,29296154-29296171,
            29296287-29296397,29296755-29297030,29297108-29297382,
            29297814-29298165,29298371-29298655,29298715-29299261,
            29301658-29301781,29301871-29301946,29302062-29302136,
            29302300-29302353,29302833-29302892,29302977-29303093,
            29303228-29303361,29303480-29303682,29303879-29303976,
            29304358-29304461,29304537-29304702,29304803-29304925,
            29305047-29305129,29305217-29305358,29305523-29305549,
            29305784-29305854,29305930-29306518
          Length = 2046

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 539  DQVNKGCNLCTCKVDNDNNAYWSCTQDTCMMSED 640
            DQ   GC++ +C   +DNN Y+ C     ++ E+
Sbjct: 984  DQYEHGCSIISCSFSDDNNVYY-CVGTAYVLPEE 1016


>08_01_0713 - 6307737-6308789,6308886-6309056
          Length = 407

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/66 (21%), Positives = 27/66 (40%)
 Frame = +2

Query: 455 CPDYKKVCSPPQITSVSCEYEQQTYAPDDQVNKGCNLCTCKVDNDNNAYWSCTQDTCMMS 634
           C DY + C+P Q+ + +  Y        + ++    LC    ++D      C   TC   
Sbjct: 58  CSDYCRDCNPSQVGTSTTYYNASMSISYNPLSCDHPLCGAGDNHDQQVLAECMDGTCTFK 117

Query: 635 EDLVND 652
            D +++
Sbjct: 118 VDSLDN 123


>10_02_0078 -
           4992019-4992594,4993156-4993248,4995984-4996202,
           4996282-4996345,4996429-4996485,4996573-4996671,
           4997296-4997327
          Length = 379

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 351 INAATIEKTIAQCRYWVLSAIAT 419
           +N   IEK I  C+YW+L A+ T
Sbjct: 29  LNKPEIEKLIFWCQYWILVALLT 51


>03_02_0377 -
           7898075-7898605,7900782-7901000,7901079-7901142,
           7901226-7901282,7901373-7901471,7901744-7901793,
           7902378-7902422,7902967-7903062
          Length = 386

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 351 INAATIEKTIAQCRYWVLSAIATSSVITQDTTMTAVP 461
           +N   IE+ I  C+YW+L A+ T      D T++ +P
Sbjct: 82  LNKPEIEQLIFWCQYWILVALMTVMERFGDFTISWLP 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,113,383
Number of Sequences: 37544
Number of extensions: 418796
Number of successful extensions: 1042
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)