Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1128
         (349 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028801-1|ABI34182.1|  286|Drosophila melanogaster LP21747p pro...    34   0.057
BT004476-1|AAO42640.1|  286|Drosophila melanogaster LP07342p pro...    34   0.057
AJ271041-1|CAB66004.1|  286|Drosophila melanogaster Gly-rich pro...    34   0.057
AE014297-4048|AAF56656.1|  286|Drosophila melanogaster CG5812-PA...    34   0.057
BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p pro...    31   0.30 
AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-P...    28   2.8  
AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p pro...    27   6.5  
AY070616-1|AAL48087.1|  197|Drosophila melanogaster RE71854p pro...    27   8.6  
AE014134-1356|AAF52571.2|  197|Drosophila melanogaster CG14534-P...    27   8.6  

>BT028801-1|ABI34182.1|  286|Drosophila melanogaster LP21747p
           protein.
          Length = 286

 Score = 33.9 bits (74), Expect = 0.057
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +3

Query: 114 MRAFVVLACVAMAYGRPEPPVGYSYSAP 197
           M+AF++++C+A+A  RPE   GY+Y+ P
Sbjct: 1   MKAFILMSCLALAAARPE--AGYNYNRP 26


>BT004476-1|AAO42640.1|  286|Drosophila melanogaster LP07342p
           protein.
          Length = 286

 Score = 33.9 bits (74), Expect = 0.057
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +3

Query: 114 MRAFVVLACVAMAYGRPEPPVGYSYSAP 197
           M+AF++++C+A+A  RPE   GY+Y+ P
Sbjct: 1   MKAFILMSCLALAAARPE--AGYNYNRP 26


>AJ271041-1|CAB66004.1|  286|Drosophila melanogaster Gly-rich
           protein protein.
          Length = 286

 Score = 33.9 bits (74), Expect = 0.057
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +3

Query: 114 MRAFVVLACVAMAYGRPEPPVGYSYSAP 197
           M+AF++++C+A+A  RPE   GY+Y+ P
Sbjct: 1   MKAFILMSCLALAAARPE--AGYNYNRP 26


>AE014297-4048|AAF56656.1|  286|Drosophila melanogaster CG5812-PA
           protein.
          Length = 286

 Score = 33.9 bits (74), Expect = 0.057
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = +3

Query: 114 MRAFVVLACVAMAYGRPEPPVGYSYSAP 197
           M+AF++++C+A+A  RPE   GY+Y+ P
Sbjct: 1   MKAFILMSCLALAAARPE--AGYNYNRP 26


>BT021279-1|AAX33427.1|  392|Drosophila melanogaster RE40185p
           protein.
          Length = 392

 Score = 31.5 bits (68), Expect = 0.30
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = +3

Query: 72  VSSKRISLVSSKHKMRAFVVL---ACVAMAYGRPEPPVGYSY 188
           +SSK   +  SK ++ +  V+   + VA   GRPEPP  YSY
Sbjct: 21  LSSKGFPITRSKMRVSSLFVVCVASLVATTLGRPEPPSPYSY 62


>AE014297-4038|AAF56647.1|  360|Drosophila melanogaster CG14254-PA
           protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 129 VLACVAMAYGRPEPPVGYSY 188
           V + VA   GRPEPP  YSY
Sbjct: 11  VASLVATTLGRPEPPSPYSY 30


>AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p
           protein.
          Length = 123

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 63  YHRVSSKRISLVSSKHKMRAFVVLACVAMAYGRPEPP 173
           Y  +S  R+ L S++H      +L+CV  A  RP PP
Sbjct: 72  YAAMSPLRMWLRSARHWALLPCILSCVPPAATRPRPP 108


>AY070616-1|AAL48087.1|  197|Drosophila melanogaster RE71854p
           protein.
          Length = 197

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 126 VVLACVAMAYGRPEPPVGYSYSAP 197
           V++A  A+   RPEPP   SYSAP
Sbjct: 9   VLMALAALVAARPEPPRD-SYSAP 31


>AE014134-1356|AAF52571.2|  197|Drosophila melanogaster CG14534-PA
           protein.
          Length = 197

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +3

Query: 126 VVLACVAMAYGRPEPPVGYSYSAP 197
           V++A  A+   RPEPP   SYSAP
Sbjct: 9   VLMALAALVAARPEPPRD-SYSAP 31


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,947,609
Number of Sequences: 53049
Number of extensions: 170067
Number of successful extensions: 655
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)