Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1127
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.3  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 346 SLYDAKYPLL*PSELNNLFISLGQ 417
           +LYDA+ P +  SE +   +SLG+
Sbjct: 847 NLYDARKPYVNGSEYHPSIVSLGE 870


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 607 WSQFYSYNSHSIYSLD 560
           W+QF SY++ S++  D
Sbjct: 64  WNQFRSYSNFSVFLFD 79


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 187 TIVLGMFFCLFDLKKKTFMCYV 122
           T+VL  F CL   +  TF   V
Sbjct: 296 TVVLAFFICLLPFRALTFWIIV 317


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 243 FFFCMVPMRLTKYCILLTKQ 184
           FF C++P R+    I+L  +
Sbjct: 299 FFLCLIPFRVFILWIILVPE 318


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -3

Query: 247 HFFFLHGAYASYKILYFINKTIVLGMFFCLFDL 149
           +FF      A+Y   ++I+  +++   F  F L
Sbjct: 248 YFFTTGNIIATYDKQFYIHNALIVRALFLFFQL 280


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -1

Query: 597 FTVITVTQSTLWTKMNYSFKATEVGVT 517
           F +IT+T   L +++   F   ++G+T
Sbjct: 296 FLIITLTIYGLLSQLQAGFSTKDIGLT 322


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -3

Query: 247 HFFFLHGAYASYKILYFINKTIVLGMFFCLFDL 149
           +FF      A+Y   ++I+  +++   F  F L
Sbjct: 244 YFFTTGNIIATYDKQFYIHNALIVRALFLFFQL 276


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,787
Number of Sequences: 336
Number of extensions: 3389
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)