Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1125
         (761 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC095492-1|AAH95492.1|  414|Homo sapiens CHST12 protein protein.       31   5.9  
BC002918-1|AAH02918.1|  414|Homo sapiens CHST12 protein protein.       31   5.9  
AY358574-1|AAQ88937.1|  414|Homo sapiens sulfotransferase Hlo pr...    31   5.9  
AK223211-1|BAD96931.1|  414|Homo sapiens carbohydrate (chondroit...    31   5.9  
AK223191-1|BAD96911.1|  414|Homo sapiens carbohydrate (chondroit...    31   5.9  
AJ289131-1|CAB92133.1|  414|Homo sapiens chondroitin 4-O-sulfotr...    31   5.9  
AF239822-1|AAF81692.1|  414|Homo sapiens chondroitin 4-O-sulfotr...    31   5.9  

>BC095492-1|AAH95492.1|  414|Homo sapiens CHST12 protein protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
 Frame = +2

Query: 317 NARFHIIT*KY--ELNKLCFNYFKNKVSKYSIDL----PFIRQIFRFHSKFFVTRGMITY 478
           NA  H+   K+     KL  +  K K+ KY+  L    PF+R I  F SKF +       
Sbjct: 209 NASAHLTFNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFRSKFELENEEFYR 268

Query: 479 YFVIPIFRQY 508
            F +P+ R Y
Sbjct: 269 KFAVPMLRLY 278


>BC002918-1|AAH02918.1|  414|Homo sapiens CHST12 protein protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
 Frame = +2

Query: 317 NARFHIIT*KY--ELNKLCFNYFKNKVSKYSIDL----PFIRQIFRFHSKFFVTRGMITY 478
           NA  H+   K+     KL  +  K K+ KY+  L    PF+R I  F SKF +       
Sbjct: 209 NASAHLTFNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFRSKFELENEEFYR 268

Query: 479 YFVIPIFRQY 508
            F +P+ R Y
Sbjct: 269 KFAVPMLRLY 278


>AY358574-1|AAQ88937.1|  414|Homo sapiens sulfotransferase Hlo
           protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
 Frame = +2

Query: 317 NARFHIIT*KY--ELNKLCFNYFKNKVSKYSIDL----PFIRQIFRFHSKFFVTRGMITY 478
           NA  H+   K+     KL  +  K K+ KY+  L    PF+R I  F SKF +       
Sbjct: 209 NASAHLTFNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFRSKFELENEEFYR 268

Query: 479 YFVIPIFRQY 508
            F +P+ R Y
Sbjct: 269 KFAVPMLRLY 278


>AK223211-1|BAD96931.1|  414|Homo sapiens carbohydrate (chondroitin
           4) sulfotransferase 12 variant protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
 Frame = +2

Query: 317 NARFHIIT*KY--ELNKLCFNYFKNKVSKYSIDL----PFIRQIFRFHSKFFVTRGMITY 478
           NA  H+   K+     KL  +  K K+ KY+  L    PF+R I  F SKF +       
Sbjct: 209 NASAHLTFNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFRSKFELENEEFYR 268

Query: 479 YFVIPIFRQY 508
            F +P+ R Y
Sbjct: 269 KFAVPMLRLY 278


>AK223191-1|BAD96911.1|  414|Homo sapiens carbohydrate (chondroitin
           4) sulfotransferase 12 variant protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
 Frame = +2

Query: 317 NARFHIIT*KY--ELNKLCFNYFKNKVSKYSIDL----PFIRQIFRFHSKFFVTRGMITY 478
           NA  H+   K+     KL  +  K K+ KY+  L    PF+R I  F SKF +       
Sbjct: 209 NASAHLTFNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFRSKFELENEEFYR 268

Query: 479 YFVIPIFRQY 508
            F +P+ R Y
Sbjct: 269 KFAVPMLRLY 278


>AJ289131-1|CAB92133.1|  414|Homo sapiens chondroitin
           4-O-sulfotransferase protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
 Frame = +2

Query: 317 NARFHIIT*KY--ELNKLCFNYFKNKVSKYSIDL----PFIRQIFRFHSKFFVTRGMITY 478
           NA  H+   K+     KL  +  K K+ KY+  L    PF+R I  F SKF +       
Sbjct: 209 NASAHLTFNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFRSKFELENEEFYR 268

Query: 479 YFVIPIFRQY 508
            F +P+ R Y
Sbjct: 269 KFAVPMLRLY 278


>AF239822-1|AAF81692.1|  414|Homo sapiens chondroitin
           4-O-sulfotransferase 2 protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
 Frame = +2

Query: 317 NARFHIIT*KY--ELNKLCFNYFKNKVSKYSIDL----PFIRQIFRFHSKFFVTRGMITY 478
           NA  H+   K+     KL  +  K K+ KY+  L    PF+R I  F SKF +       
Sbjct: 209 NASAHLTFNKFWRRYGKLSRHLMKVKLKKYTKFLFVRDPFVRLISAFRSKFELENEEFYR 268

Query: 479 YFVIPIFRQY 508
            F +P+ R Y
Sbjct: 269 KFAVPMLRLY 278


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,094,661
Number of Sequences: 237096
Number of extensions: 1405231
Number of successful extensions: 6200
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6200
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)