Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1124
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   1.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   5.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.8  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.6  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 562 RNAPP*KPSQTPKLPDNKKRKPLSITKVNTTSNN 663
           +NA   K  Q  ++PD  KRK   I ++   +NN
Sbjct: 349 QNAKTQKAFQVKRVPDPSKRKGSYIFRLPDENNN 382


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +2

Query: 224 SPIGDQYLHPH 256
           SPI ++++HPH
Sbjct: 93  SPIDEKFVHPH 103


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 357 LSSNNLALEPECCYQ 313
           L  N+ ALEPE C+Q
Sbjct: 571 LGINSDALEPEWCWQ 585


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 369 QDNTALVQQGSYTYTAPDGQVITVEY 446
           QD+T +V++ + T      QV+ +EY
Sbjct: 177 QDDTPMVRRAAATKLGELAQVVELEY 202


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 147 EQNFNNYQPQQQE 185
           ++NF NY+P+  E
Sbjct: 226 QENFENYEPKSPE 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,383
Number of Sequences: 336
Number of extensions: 3732
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)