Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1124
(719 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0320 + 42708082-42708324,42708359-42708409,42708987-427091... 32 0.53
06_03_1228 - 28563546-28563630,28563897-28564000,28564256-285647... 30 2.1
04_03_0217 - 12769956-12770252,12770340-12770490,12770572-127708... 29 2.8
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 2.8
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 29 3.7
09_04_0262 - 16219281-16219398,16219516-16219573,16219720-162199... 29 4.9
06_03_0854 + 25400855-25403741,25406174-25407708 29 4.9
06_01_0741 - 5510159-5510581,5510862-5511124,5511223-5511400,551... 29 4.9
05_05_0201 + 23206859-23206998,23207858-23207936,23208121-232082... 29 4.9
03_01_0614 + 4515515-4515540,4515988-4516209,4516681-4516768,451... 28 6.5
01_04_0124 + 16359695-16359734,16360217-16360453,16361133-163621... 28 6.5
01_03_0212 + 13842142-13842634,13842727-13843319 28 6.5
01_03_0209 - 13820980-13821572,13821665-13822157 28 6.5
10_01_0036 + 427678-428029,431043-431968 28 8.6
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 28 8.6
05_03_0188 + 9417186-9417306,9417418-9417604,9417669-9417801,941... 28 8.6
04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334 28 8.6
03_04_0148 - 17708737-17709027,17709270-17709518,17709713-177098... 28 8.6
>01_07_0320 +
42708082-42708324,42708359-42708409,42708987-42709122,
42709226-42709275,42709978-42710066,42710398-42710434,
42710435-42710471,42710588-42710733,42711099-42711241,
42711735-42711768,42711962-42712064,42712236-42712381,
42712982-42713323,42713416-42713656,42713733-42713788,
42713852-42713920
Length = 640
Score = 31.9 bits (69), Expect = 0.53
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Frame = +3
Query: 423 GQVITVEYTADEFGFRVSGDHIPTPPP-VSAEIQKGLD-LIYAGI--KANQERAAIEAKS 590
G + +E T F ++G+ P+PPP VS + GLD L Y I +A++ R A+ A S
Sbjct: 15 GDAVLLEITDASF---IAGEADPSPPPPVSVDDLAGLDPLPYPTIWVRADRTRQALAAPS 71
Query: 591 NPEA 602
+P++
Sbjct: 72 SPDS 75
>06_03_1228 -
28563546-28563630,28563897-28564000,28564256-28564759,
28564854-28564932,28566053-28566130,28566227-28566268,
28566352-28566449,28566542-28566673,28566757-28566879
Length = 414
Score = 29.9 bits (64), Expect = 2.1
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Frame = +3
Query: 219 PKVQLETSTYIPIIRFDKEQGTDGSYKTSYETGNNIQAQEQGYLK---TVGDNQDN-TAL 386
P VQ TSTY+P++ ++ + + +QA +L VG++Q + T
Sbjct: 224 PAVQTNTSTYVPLLGGVRDHQAHFAQVNQGQFSPAVQANTSTHLPFSGGVGEHQIHFTPK 283
Query: 387 VQQGSYTYTAPDGQVITVEYTADEFGFRVSGDHIPTPP 500
V QG + P Q T + GFR H TPP
Sbjct: 284 VNQGQF---PPSVQTNTSAHVPYSGGFREHQVHF-TPP 317
>04_03_0217 -
12769956-12770252,12770340-12770490,12770572-12770803,
12770979-12771040,12771189-12771235,12771313-12771431,
12771513-12771671,12771745-12771925,12772010-12772361,
12772673-12772717,12772789-12772854,12772951-12773016,
12773107-12773178,12773283-12773357,12773437-12773508,
12774169-12774240,12774499-12774570,12776252-12776323,
12776400-12776471,12776811-12776997,12778343-12778457
Length = 861
Score = 29.5 bits (63), Expect = 2.8
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -1
Query: 488 DVVTGNSETELVSGVLDGNDLTIRGCVCIGSLLDQSSVVLVITDCLQITLLLSLNVVTSF 309
D+V G S L+S + N L +R C G D +V + + L + L LS N +T
Sbjct: 201 DIVNGISPLALISNLTSLNTLILRNCKIYG---DLGAVDFSMFEKLSL-LDLSFNNITGK 256
Query: 308 I*SFVASVGSL-FLIETDNGDVG 243
+ + ++G+L FL +N G
Sbjct: 257 VSQSILNLGNLQFLFLGNNNLAG 279
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/119 (21%), Positives = 51/119 (42%)
Frame = +3
Query: 99 KVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRSAKPVDDFRPKVQLETSTYIPIIRFDKEQ 278
+V+ E + + +EQN Q Q+QE K + P+ + + F+ ++
Sbjct: 1230 RVASVEEIETHNNATIEQNVGYQQLQEQESVEFKETEVLEPQGVIPSHNVSSSEEFNPQE 1289
Query: 279 GTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTYTAPDGQVITVEYTAD 455
T E G++ QA+E + ++ +N+A + + AP+ V+ E T D
Sbjct: 1290 TV-----TKEEPGSDTQAEESPVVIEDTEDVNNSAALSE----KIAPEEHVLATETTVD 1339
>07_01_0577 -
4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/56 (37%), Positives = 23/56 (41%)
Frame = +1
Query: 466 SEFPVTTSLPLPLYRLKFKKALTLSTPASRLTRNAPP*KPSQTPKLPDNKKRKPLS 633
S F SLPLP + KK L TPA R PP P TP + P S
Sbjct: 22 SPFSPPPSLPLPSALMPPKKR-RLFTPAPRHAATPPPPPPPPTPAVEPTLPIPPAS 76
>09_04_0262 -
16219281-16219398,16219516-16219573,16219720-16219910,
16220131-16220281,16220368-16220548
Length = 232
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 495 PPPVSAEIQKGLDLIYAGIKAN-QERAAIEAKSNPEAARQQEEKAALDYKGQYYQQ 659
PPP + + GLD ++ N E AA E A QQ +++A + G+ QQ
Sbjct: 65 PPPTTMNLLSGLDAPAVEVEPNTAETAADELPLIKAPADQQSDESASEAAGEKAQQ 120
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 28.7 bits (61), Expect = 4.9
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +3
Query: 390 QQGSYTYTAPDGQVITVEYTADEFGFRVSGDHIPTPPPVSAEIQKGLDLIYAGIKANQER 569
+QG++ Y A +V+ E A FG D TP P+SAE++ L + +A +ER
Sbjct: 156 EQGAWAYDAA-ARVLRGEAAATNFG-----DPAQTPSPLSAEMRSML-AFFDRARARRER 208
Query: 570 AAIEAKSNPEAARQQEEKA 626
E + A E A
Sbjct: 209 VVEERGAAAAEAEASEAPA 227
>06_01_0741 -
5510159-5510581,5510862-5511124,5511223-5511400,
5511411-5511698,5511801-5511899,5511973-5512440,
5512559-5512744,5512887-5513004,5513035-5513228
Length = 738
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 112 SQNSKWKTNSHLNKTSTTISPS-NRNIGQQNQSMTSDLKSNWRPVPTSPLSVSIRNK 279
SQ +W T S N+ S ++ + + GQ N + S S W PVP + +R++
Sbjct: 537 SQMHQWTTLSGSNEVSVRVTMHRSTDPGQPNGVVLSAATSIWLPVPCDHVFAFVRDE 593
>05_05_0201 +
23206859-23206998,23207858-23207936,23208121-23208219,
23208561-23208674,23208762-23208910,23209010-23209091,
23209170-23209255,23209520-23209750,23209830-23210727
Length = 625
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 127 WKTNSHLNKTSTTISPSNRNIGQQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEATK 300
W + +N T+ P+ + QN + S +N P P+SP + R + P+ ATK
Sbjct: 488 WAMPASVNSTNP-FQPATYQM--QNPPVASVAPTNTYPAPSSPYAAPPRQQVPSPATK 542
>03_01_0614 +
4515515-4515540,4515988-4516209,4516681-4516768,
4517084-4517123,4517259-4517305,4517464-4517584,
4517931-4518091
Length = 234
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 91 PKGRFR*SQNSKWKTNSHLNKTSTTISPSNRNIG-QQNQSMTSDLKSNWRPVPTSPLSVS 267
P F+ + W S + +S +PS+ N+G Q S S S +P P +
Sbjct: 17 PDPNFQDNPTQPWYPQSVVGSSSHPSTPSSSNVGPHQRASDNSQSSSRAQPSPAEAAGII 76
Query: 268 IRNKE 282
R K+
Sbjct: 77 ARLKD 81
>01_04_0124 + 16359695-16359734,16360217-16360453,16361133-16362104,
16362211-16362398,16362564-16363942,16364024-16365047,
16365171-16365566,16367484-16367999,16368085-16368226,
16369409-16369553,16371351-16371432,16371851-16371895,
16372018-16372140
Length = 1762
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 525 GLDLIYAGIKANQERAAIEAKSNPEAARQQEEKAALDYKGQYYQQ*LTSAISQVN 689
G++L++ + RA KS A + + + + K Y+Q LTS ++QVN
Sbjct: 1322 GMELVHRNVGGFVLRAIYLTKSISLALQALQIRYGIPNKSNLYRQFLTSKVTQVN 1376
>01_03_0212 + 13842142-13842634,13842727-13843319
Length = 361
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 423 GQVITVEYTADEFGFRVSGDHIPTPPPVS 509
G + + E+ GF SG H P P P+S
Sbjct: 110 GDLTSTEFVQQFTGFNASGFHSPPPTPIS 138
>01_03_0209 - 13820980-13821572,13821665-13822157
Length = 361
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 423 GQVITVEYTADEFGFRVSGDHIPTPPPVS 509
G + + E+ GF SG H P P P+S
Sbjct: 110 GDLTSTEFVQQFTGFNASGFHSPPPTPIS 138
>10_01_0036 + 427678-428029,431043-431968
Length = 425
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 441 EYTADEFGFRVSGDHIPTPPP 503
EYT F FRVSGD PPP
Sbjct: 38 EYTPVLFFFRVSGDDDQPPPP 58
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 115 QNSKWKTNSHLNKTSTTISPSNRNIGQQNQSMTSDLKS 228
+++ T + NK+ST + SN +GQ +Q S+LK+
Sbjct: 644 ESTNLATVTVFNKSSTDLGWSNDKLGQTSQQSISELKN 681
>05_03_0188 +
9417186-9417306,9417418-9417604,9417669-9417801,
9418673-9418752,9421940-9422011,9422211-9422282,
9422361-9422432,9422720-9422791,9423038-9423109,
9423335-9423406,9423497-9423568,9423648-9423722,
9423824-9423895,9424072-9424137,9424223-9424299,
9424642-9425021,9425112-9425310,9425380-9425538,
9425620-9425738,9425942-9426092,9426257-9426488,
9426573-9426723,9426808-9427125
Length = 1007
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = -1
Query: 488 DVVTGNSETELVSGVLDGNDLTIRGCVCIGSLLDQSSVVLVITDCLQITLL-LSLNVVTS 312
D+V G+S +S + ++L +R C G+L + + +TLL LS N +T
Sbjct: 322 DIVNGSSSLGFISNMTSLSNLILRNCKLSGNL-----EAIDFSKFATLTLLDLSFNSITG 376
Query: 311 FI*SFVASVGSL-FLIETDNGDVG 243
+ + ++G L FL +N G
Sbjct: 377 QVPQSILNLGMLEFLFLGNNSLTG 400
>04_03_0452 - 16052449-16052856,16053017-16053321,16053383-16054334
Length = 554
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 133 TNSHLNKTSTTISPSNRNIGQQNQSMTSDLKSNWRPV 243
T S L K S P ++ ++ MTS+ +W P+
Sbjct: 77 TTSELEKDSNAAKPCRSDMNREPTKMTSEATRSWCPI 113
>03_04_0148 -
17708737-17709027,17709270-17709518,17709713-17709851,
17710050-17710268,17710360-17710735,17711741-17711909
Length = 480
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 117 EQQVEDQLPLEQNFNNYQ-PQQQEYRSAKPVDDFRPKVQLETSTYIPIIRFDKEQ 278
E QVE L++ + + P + R A FR +LE YIP+ DKE+
Sbjct: 99 EAQVETTNQLKRIVDCIEKPLSNKVRHALETPSFRRMKRLEARLYIPLYEEDKEE 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,930,101
Number of Sequences: 37544
Number of extensions: 432300
Number of successful extensions: 1503
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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