Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1124
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 31 0.63
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 31 0.63
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 31 0.63
Z70034-5|CAA93851.2| 197|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical pr... 29 2.5
AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein. 29 2.5
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 3.3
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 29 3.3
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 29 3.3
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 29 3.3
AF003385-5|AAB54245.1| 494|Caenorhabditis elegans Hypothetical ... 29 3.3
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 29 4.4
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 4.4
Z81485-6|CAB03979.1| 784|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical ... 28 5.8
AL032647-2|CAA21689.1| 178|Caenorhabditis elegans Hypothetical ... 28 5.8
AF067613-5|AAN73864.1| 266|Caenorhabditis elegans Hypothetical ... 28 5.8
U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain (pr... 28 7.7
U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain (pr... 28 7.7
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 28 7.7
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 31.5 bits (68), Expect = 0.63
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = +3
Query: 240 STYIPIIRFDKEQ-GTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTY-- 410
S PI + D GTD S + G I ++G K +G + + G+Y Y
Sbjct: 7852 SVVYPITKPDGTPLGTDASGSFVTDDGQAIGKDDEG--KPIGPDGQTLPIDDSGNYIYPV 7909
Query: 411 TAPDGQVITVEYTADEFGFRVSGDHIPTPPPVSAEI 518
PDGQ + + + + D IP P S +
Sbjct: 7910 VGPDGQALPTDESGKTVYPVLGPDGIPLPTDASGAV 7945
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 31.5 bits (68), Expect = 0.63
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = +3
Query: 240 STYIPIIRFDKEQ-GTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTY-- 410
S PI + D GTD S + G I ++G K +G + + G+Y Y
Sbjct: 7897 SVVYPITKPDGTPLGTDASGSFVTDDGQAIGKDDEG--KPIGPDGQTLPIDDSGNYIYPV 7954
Query: 411 TAPDGQVITVEYTADEFGFRVSGDHIPTPPPVSAEI 518
PDGQ + + + + D IP P S +
Sbjct: 7955 VGPDGQALPTDESGKTVYPVLGPDGIPLPTDASGAV 7990
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 31.5 bits (68), Expect = 0.63
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = +3
Query: 240 STYIPIIRFDKEQ-GTDGSYKTSYETGNNIQAQEQGYLKTVGDNQDNTALVQQGSYTY-- 410
S PI + D GTD S + G I ++G K +G + + G+Y Y
Sbjct: 7897 SVVYPITKPDGTPLGTDASGSFVTDDGQAIGKDDEG--KPIGPDGQTLPIDDSGNYIYPV 7954
Query: 411 TAPDGQVITVEYTADEFGFRVSGDHIPTPPPVSAEI 518
PDGQ + + + + D IP P S +
Sbjct: 7955 VGPDGQALPTDESGKTVYPVLGPDGIPLPTDASGAV 7990
>Z70034-5|CAA93851.2| 197|Caenorhabditis elegans Hypothetical
protein C18E9.5 protein.
Length = 197
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 260 DNGDVGTGLQLDFRSEVIDWFC*PIFLLLGLIVV 159
D+ D G + + RSE++DW I ++LGL+ +
Sbjct: 13 DDFDYGDNVSIIDRSEIVDWSAIVIKIILGLVFI 46
>Z81523-4|CAB04243.1| 824|Caenorhabditis elegans Hypothetical
protein F32H2.3 protein.
Length = 824
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 121 SKWKTNSHLNKTSTTISPSNRNIGQQNQSMTSDLKSNWRPVPT-SPLSVSIRNKEPTEA 294
S + +H KTST P+NR IGQ Q DL S + P S+S + PT +
Sbjct: 220 SPMNSTNHDEKTSTPKRPTNRKIGQY-QGPNFDLSSIYVGSPQHQNTSISTGQQMPTSS 277
>AY340594-1|AAQ17186.1| 824|Caenorhabditis elegans SPD-2 protein.
Length = 824
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 121 SKWKTNSHLNKTSTTISPSNRNIGQQNQSMTSDLKSNWRPVPT-SPLSVSIRNKEPTEA 294
S + +H KTST P+NR IGQ Q DL S + P S+S + PT +
Sbjct: 220 SPMNSTNHDEKTSTPKRPTNRKIGQY-QGPNFDLSSIYVGSPQHQNTSISTGQQMPTSS 277
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 93 QRKVSLKPEQQVEDQLPLEQNFNNYQPQQQEYRSAKPVDDFRPKVQLETST 245
Q + ++P+QQ P+ N N QQ YR + RP VQ++ T
Sbjct: 23 QMRPVMQPQQQRTMYYPVRTNCQNRCNQQTRYRWNVRPTNIRPNVQVQIRT 73
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +3
Query: 114 PEQQVEDQLPLEQNFNNYQPQQQEYRSAKPVDDFRPK-VQLETSTYI---PIIRFDKEQG 281
P+QQ + Q + Y+PQQQ+Y S P D RP+ V+ YI P R +
Sbjct: 73 PQQQFQRQGQSQYIQQQYRPQQQQY-SQYPRFDLRPQPVRPVRPVYIASTPASRLSYTER 131
Query: 282 TDGSYKTSYETGNNIQAQ 335
SY E N + +
Sbjct: 132 PQTSYGDEIEDTNYLSGR 149
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 154 TSTTIS--PSNRNIGQQNQSMTSD--LKSNWRPVPTSPLSVSIRNKEP 285
+ST IS P + + Q+ S+ S L S+ PT PLSV++RN+ P
Sbjct: 467 SSTAISEVPHSLSHHQRTPSVASSIQLSSHMMNNPTHPLSVNVRNQSP 514
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 154 TSTTIS--PSNRNIGQQNQSMTSD--LKSNWRPVPTSPLSVSIRNKEP 285
+ST IS P + + Q+ S+ S L S+ PT PLSV++RN+ P
Sbjct: 484 SSTAISEVPHSLSHHQRTPSVASSIQLSSHMMNNPTHPLSVNVRNQSP 531
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 154 TSTTIS--PSNRNIGQQNQSMTSD--LKSNWRPVPTSPLSVSIRNKEP 285
+ST IS P + + Q+ S+ S L S+ PT PLSV++RN+ P
Sbjct: 596 SSTAISEVPHSLSHHQRTPSVASSIQLSSHMMNNPTHPLSVNVRNQSP 643
>AF003385-5|AAB54245.1| 494|Caenorhabditis elegans Hypothetical
protein R08F11.3 protein.
Length = 494
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 188 IFLLLGLIVVEVLFKWELVFHLLFWLQRNLPLG 90
+F +L L++ + +FHLL+W +RNLP G
Sbjct: 1 MFFILVLVLTGISI---YLFHLLYWKRRNLPPG 30
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 28.7 bits (61), Expect = 4.4
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +3
Query: 93 QRKVSLKPEQQVEDQLPLEQNFNN--YQPQQQEYRSAKPVDDFRPKVQLETSTYIPIIRF 266
QR+ +L+ QQ + ++ + ++ Y PQQ Y + P +P Q +Y +
Sbjct: 524 QREQALQRFQQQQQEMAMRRHQQQAYYNPQQMGYGAPPPSGPQQPPQQ----SYYGYQQG 579
Query: 267 DKEQGTDGSYKTSYETGN-NIQAQEQGYLKTVGDNQDNTALVQQGSYTY 410
+ Q S + Y+ + + Q Q+Q Y + NQ T VQQ Y
Sbjct: 580 PQSQAPPPS--SQYQQSHASTQQQQQQYYQHYQANQTVTQPVQQAQQQY 626
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 28.7 bits (61), Expect = 4.4
Identities = 36/173 (20%), Positives = 60/173 (34%), Gaps = 6/173 (3%)
Frame = +1
Query: 157 STTISPSNRNIGQQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEATKLHMKLVTTFRLK 336
ST +P+ + + +KS PT+P ++ PT T + T
Sbjct: 284 STPTTPTTMKSTPTTPTTPTTMKST-PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 342
Query: 337 SKVI*RQSVITKTTLLWSNRDPIHTQPLMVKXXXXXXXXXXXVSEFPVTTSLPLPLYRLK 516
+ + T TT+ + P T P +K + P T + P +
Sbjct: 343 TMKSTPTTPTTPTTMKSTPTTP--TTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTP 400
Query: 517 FKKAL---TLSTPASRLTRNAPP*KPS---QTPKLPDNKKRKPLSITKVNTTS 657
T +TP + T + P P+ TP P K P + T + T+S
Sbjct: 401 TTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSSPTTPTTMKTSS 453
>Z81485-6|CAB03979.1| 784|Caenorhabditis elegans Hypothetical
protein C49F5.6 protein.
Length = 784
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +1
Query: 178 NRNIGQQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEATKLHMKLVTTFRLKSKVI*RQ 357
N N G + LK P+P+SPL ++ + ++T + R + I R
Sbjct: 177 NPNSGVTSIDGVERLKKEIAPLPSSPLKLTSTSTIEFQSTVTSSSPIMRSRETTSTIQRS 236
Query: 358 SVITKTTLLWSN 393
+I+ TT + S+
Sbjct: 237 KIISSTTKVMSD 248
>Z69791-3|CAA93662.1| 924|Caenorhabditis elegans Hypothetical
protein F39D8.1c protein.
Length = 924
Score = 28.3 bits (60), Expect = 5.8
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Frame = +3
Query: 147 EQNFNNYQPQQQEYRSAKPVD--DFRPKVQLETSTYIPIIR-FDKEQGTDGSYKTSYETG 317
+QN NNYQ Q Q A D++P + Y + FD++QG G Y+ +
Sbjct: 304 DQNQNNYQGQYQGSTLAPSAGEVDYQPFTPSGNTDYNNNAQGFDQQQGQQGQYQQNQNDQ 363
Query: 318 NNIQAQ---EQGYLKTVGD-NQDNTALVQQGSYTYTAPDGQVIT 437
I G T G N N+ VQ TY QV+T
Sbjct: 364 QVIYPSGGVVAGGAVTGGSYNSPNSGYVQAQPQTYPT---QVVT 404
>Z69791-2|CAA93661.2| 919|Caenorhabditis elegans Hypothetical
protein F39D8.1b protein.
Length = 919
Score = 28.3 bits (60), Expect = 5.8
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Frame = +3
Query: 147 EQNFNNYQPQQQEYRSAKPVD--DFRPKVQLETSTYIPIIR-FDKEQGTDGSYKTSYETG 317
+QN NNYQ Q Q A D++P + Y + FD++QG G Y+ +
Sbjct: 299 DQNQNNYQGQYQGSTLAPSAGEVDYQPFTPSGNTDYNNNAQGFDQQQGQQGQYQQNQNDQ 358
Query: 318 NNIQAQ---EQGYLKTVGD-NQDNTALVQQGSYTYTAPDGQVIT 437
I G T G N N+ VQ TY QV+T
Sbjct: 359 QVIYPSGGVVAGGAVTGGSYNSPNSGYVQAQPQTYPT---QVVT 399
>Z69791-1|CAA93660.1| 945|Caenorhabditis elegans Hypothetical
protein F39D8.1a protein.
Length = 945
Score = 28.3 bits (60), Expect = 5.8
Identities = 31/104 (29%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Frame = +3
Query: 147 EQNFNNYQPQQQEYRSAKPVD--DFRPKVQLETSTYIPIIR-FDKEQGTDGSYKTSYETG 317
+QN NNYQ Q Q A D++P + Y + FD++QG G Y+ +
Sbjct: 322 DQNQNNYQGQYQGSTLAPSAGEVDYQPFTPSGNTDYNNNAQGFDQQQGQQGQYQQNQNDQ 381
Query: 318 NNIQAQ---EQGYLKTVGD-NQDNTALVQQGSYTYTAPDGQVIT 437
I G T G N N+ VQ TY QV+T
Sbjct: 382 QVIYPSGGVVAGGAVTGGSYNSPNSGYVQAQPQTYPT---QVVT 422
>AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical
protein Y116A8C.5 protein.
Length = 675
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 420 DGQVITVE-YTADEFGFRVSGDHIPTPPPVSAEIQK 524
D ++I E Y D+ FR+S TP P+S E+ K
Sbjct: 598 DQKIIGFEDYNLDQLFFRISAMSFCTPAPLSLEVSK 633
>AL032647-2|CAA21689.1| 178|Caenorhabditis elegans Hypothetical
protein Y57A10B.2 protein.
Length = 178
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +1
Query: 136 NSHLNKTSTTISPSNRNIGQQNQSMTSDLKSNWRPVPTSPLSVSIRNKEPTEATK 300
++H +S T SPS+ + S +S+ K + + ++PLS S + EP+ +T+
Sbjct: 86 STHFVTSSATASPSS------SSSSSSEYKKKVKRLSSNPLSSSTSSSEPSTSTR 134
>AF067613-5|AAN73864.1| 266|Caenorhabditis elegans Hypothetical
protein F56D6.6 protein.
Length = 266
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 501 PVSAEIQKGLDLIYAGIKANQERAAIEAKSNPEAARQQEEK 623
P +A +QK + A +KAN ++ A E+K N E + + EK
Sbjct: 119 PDAAALQKTFNNSSAQMKANFDKNAAESKENFEKKKDEMEK 159
>U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform b protein.
Length = 643
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 115 QNSKWKTNSHLNKTSTTISPSNRNIGQQNQSMTSDLK-SNWRPVPTSP 255
QNS T H N S++ SP N N S ++L S R V TSP
Sbjct: 452 QNSLKVTTVHDNTASSSSSPDNSETQNNNLSKITNLNLSIEREVSTSP 499
>U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform a protein.
Length = 635
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 115 QNSKWKTNSHLNKTSTTISPSNRNIGQQNQSMTSDLK-SNWRPVPTSP 255
QNS T H N S++ SP N N S ++L S R V TSP
Sbjct: 444 QNSLKVTTVHDNTASSSSSPDNSETQNNNLSKITNLNLSIEREVSTSP 491
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 105 SLKPEQQVEDQLPLEQNFNNYQPQQQEYRSAKP 203
S+ P+ QV Q +QPQQQ Y S P
Sbjct: 455 SISPQPQVSHHHHQPQQHQQHQPQQQYYPSPPP 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,516,351
Number of Sequences: 27780
Number of extensions: 348971
Number of successful extensions: 1451
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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