Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1119
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    49   8e-05
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    40   0.069
UniRef50_Q9CDJ7 Cluster: Glucosyltransferase-S; n=1; Lactococcus...    34   2.6  
UniRef50_A2X0B4 Cluster: Putative uncharacterized protein; n=2; ...    34   3.4  
UniRef50_UPI0000E470FA Cluster: PREDICTED: hypothetical protein;...    33   4.5  
UniRef50_P08782 Cluster: Virulence plasmid protein pGP2-D; n=10;...    33   4.5  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 49.2 bits (112), Expect = 8e-05
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = +3

Query: 27  FLLLRYVDELTAHLVLSGYWSP 92
           FLLLR+VDELTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 39.5 bits (88), Expect = 0.069
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 215 AGWWYLPVRTHKRSCHQHQ 271
           A WWYLP RTHKRS H++Q
Sbjct: 569 AEWWYLPARTHKRSYHRYQ 587


>UniRef50_Q9CDJ7 Cluster: Glucosyltransferase-S; n=1; Lactococcus
           lactis subsp. lactis|Rep: Glucosyltransferase-S -
           Lactococcus lactis subsp. lactis (Streptococcus lactis)
          Length = 482

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = +1

Query: 373 NMYGGITLSCDEIYRLCAVNLHTNDNNTTDSVYAKFQTNVFQVPSHTSSFNMYVYVI 543
           N YGG  LS    Y +   N  TN  + TDS+Y K+  +   V     S N +  ++
Sbjct: 426 NYYGGHELSNSHTYLIDGYNAQTNQFHITDSIYGKYWKDTSTVVKAYYSNNSFALLL 482


>UniRef50_A2X0B4 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 738

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 296 GTQSERESADAGGRTSCESARVGTTNPPSSDE 201
           G++SE E  DAGGR+  ++  + TTN   SDE
Sbjct: 25  GSESEDEGGDAGGRSGNQNRYLRTTNASDSDE 56


>UniRef50_UPI0000E470FA Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 538

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +1

Query: 223 VVPTRADSQEVLPPASADSLSLCVPHYKEHFLSN 324
           V+PT  D   V  P+ ++S+   VP Y  H LSN
Sbjct: 322 VIPTEQDQPLVFNPSQSNSVGFSVPRYNPHALSN 355


>UniRef50_P08782 Cluster: Virulence plasmid protein pGP2-D; n=10;
           root|Rep: Virulence plasmid protein pGP2-D - Chlamydia
           trachomatis
          Length = 354

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -2

Query: 214 LVLMRSSNAFRFEGWDSRCNYTET 143
           +VL R SN+F+FEGW  R  +T+T
Sbjct: 75  VVLSRESNSFQFEGWIPRIRFTKT 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,266,205
Number of Sequences: 1657284
Number of extensions: 13589497
Number of successful extensions: 30182
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30156
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)