Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1116
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   1.1  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   1.5  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   1.9  
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         25   3.4  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         25   3.4  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         25   3.4  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    23   7.9  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 307  LPADSGCGSPGNCSRHSLSVQY 242
            LP D+  G PGNC   ++ + Y
Sbjct: 1822 LPPDNDKGYPGNCGSSTIGITY 1843


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 369  RRNQIQDAAKPAHNPHDRDGAPPTPP 446
            RRN  + AA        R G PPTPP
Sbjct: 1110 RRNANRRAATARRREERRAGLPPTPP 1135


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 369  RRNQIQDAAKPAHNPHDRDGAPPTPP 446
            RRN  + AA+       R G PP+PP
Sbjct: 1047 RRNASRRAARARQRELQRAGRPPSPP 1072


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 393 PHLGSGCVAGASCT*LTQMPSSRTS**SCCQPTPAAEA 280
           PH   G VA  +C  L  +PS++ S  S  +PTP  E+
Sbjct: 114 PHAEEGYVAYDTCLPLGILPSNQRS-SSSSKPTPCWES 150


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 393 PHLGSGCVAGASCT*LTQMPSSRTS**SCCQPTPAAEA 280
           PH   G VA  +C  L  +PS++ S  S  +PTP  E+
Sbjct: 114 PHAEEGYVAYDTCLPLGILPSNQRS-SSSSKPTPCWES 150


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 393 PHLGSGCVAGASCT*LTQMPSSRTS**SCCQPTPAAEA 280
           PH   G VA  +C  L  +PS++ S  S  +PTP  E+
Sbjct: 114 PHAEEGYVAYDTCLPLGILPSNQRS-SSSSKPTPCWES 150


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 411 DCALVWPHLGSGCVAGASCT 352
           DC    P+ G+GC   + CT
Sbjct: 9   DCKCTSPNCGAGCGCESRCT 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,412
Number of Sequences: 2352
Number of extensions: 16399
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)