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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1112
         (705 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   2e-04
SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   3e-04
SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   3e-04
SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1)                   40   0.003
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)                       39   0.003
SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.014
SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)            37   0.014
SB_40765| Best HMM Match : DX (HMM E-Value=1.4)                        37   0.014
SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)                    37   0.014
SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8)                     37   0.018
SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)                     37   0.018
SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)                    37   0.018
SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)            37   0.018
SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)                       37   0.018
SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)                   36   0.024
SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)                       36   0.024
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.024
SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5)                     36   0.032
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)                36   0.032
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)                     36   0.042
SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)                     36   0.042
SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.042
SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.056
SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.074
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)               35   0.074
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.074
SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.074
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)                    34   0.098
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.098
SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5)                    34   0.098
SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.098
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)                    34   0.098
SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)             34   0.13 
SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)                    34   0.13 
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)                 34   0.13 
SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.30 
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)         33   0.30 
SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082)                  33   0.30 
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)                 33   0.30 
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)                 33   0.30 
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)                32   0.52 
SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7)                       31   0.69 
SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.91 
SB_2368| Best HMM Match : Patched (HMM E-Value=8.6e-08)                31   0.91 
SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)                       31   1.2  
SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2)                     30   1.6  
SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_25515| Best HMM Match : Complex1_LYR (HMM E-Value=9.6)              30   2.1  
SB_47421| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_57001| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_53803| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_26191| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_45836| Best HMM Match : EGF (HMM E-Value=6.7e-21)                   28   6.4  
SB_35989| Best HMM Match : SEC-C (HMM E-Value=3.5)                     28   8.5  
SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21)                  28   8.5  
SB_37127| Best HMM Match : DUF352 (HMM E-Value=3.3)                    28   8.5  
SB_8123| Best HMM Match : Tfb2 (HMM E-Value=0.00019)                   28   8.5  
SB_7214| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.5  

>SB_16492| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 295

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = -1

Query: 369 TDRLEPLSLRRDFGSLCILYRMFHGKCSEEMFEII-PASRFYHSTARHRSRIHPYYLEPL 193
           T +L PL  RRD   L +L+++ +G  S  +  ++ PA+  Y++   H +    ++    
Sbjct: 187 TLKLLPLEYRRDITDLVLLFKIKNGDVSISLASLLSPATSRYNTRNYHSNNYRLFFTH-- 244

Query: 192 RSSTVRFQRSFLLRTIRLWNELPS 121
             +   ++ S+  RT++LWN LPS
Sbjct: 245 --NQNYYRNSYFPRTVKLWNSLPS 266


>SB_54752| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 792

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
 Frame = -1

Query: 369 TDRLEPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSR-IHPYYLEPL 193
           T +L PL  RRD   L +L+++ +G  S     I  AS    +T+R+ +R  HP      
Sbjct: 684 TLKLLPLEYRRDITDLVLLFKIKNGDVS-----ISSASLLSPATSRYNTRSYHPNNYRLF 738

Query: 192 RSSTVRFQR-SFLLRTIRLWNELPS 121
            +    + R S+  RT++LWN LPS
Sbjct: 739 STHNQNYYRNSYFPRTVKLWNSLPS 763


>SB_20783| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 295

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
 Frame = -1

Query: 369 TDRLEPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSR-IHPYYLEPL 193
           T +L PL  RRD   L +L+++ +G  S     I  AS    +T+R+ +R  HP      
Sbjct: 187 TLKLLPLEYRRDITDLVLLFKIKNGDVS-----ISSASLLSPATSRYNTRSYHPNNYRLF 241

Query: 192 RSSTVRFQR-SFLLRTIRLWNELPS 121
            +    + R S+  RT++LWN LPS
Sbjct: 242 STHNQNYYRNSYFPRTVKLWNSLPS 266


>SB_51257| Best HMM Match : Pox_F16 (HMM E-Value=4.1)
          Length = 243

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 30/99 (30%), Positives = 42/99 (42%)
 Frame = -1

Query: 357 EPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTV 178
           + L +RR    LC+ Y     K    +  I    +F  +  R R+    Y    ++S+ +
Sbjct: 141 DSLEVRRQLAQLCLFY-----KIRNNLVNIALPQQFQPNLRRSRTNSSKY--NQIQSNVL 193

Query: 177 RFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 61
               SF  RTIR WN LPS V  E   +  FK     VL
Sbjct: 194 SHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 231


>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 885

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = -1

Query: 234 RHRSRIHPYYLEPLRSSTVRFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRV 64
           R   R HP    PL +S+     SF  RTI  WN LP+ +F E   +  FK  + R+
Sbjct: 823 RKTRRSHPESFIPLSTSSASEHLSFFSRTIIQWNNLPALLFNEPCSLPIFKDKISRL 879


>SB_49429| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 918

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 29/99 (29%), Positives = 41/99 (41%)
 Frame = -1

Query: 357  EPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTV 178
            + L +RR    LC+ Y     K    +  I    +F  +    R+    Y    ++S+ +
Sbjct: 816  DSLEVRRQLAQLCLFY-----KIRNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 868

Query: 177  RFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 61
                SF  RTIR WN LPS V  E   +  FK     VL
Sbjct: 869  SHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 906


>SB_31373| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
          Length = 198

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 29/99 (29%), Positives = 41/99 (41%)
 Frame = -1

Query: 357 EPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTV 178
           + L +RR    LC+ Y     K    +  I    +F  +    R+    Y    ++S+ +
Sbjct: 96  DSLEVRRQLAQLCLFY-----KIRNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 148

Query: 177 RFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 61
               SF  RTIR WN LPS V  E   +  FK     VL
Sbjct: 149 SHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 186


>SB_40765| Best HMM Match : DX (HMM E-Value=1.4)
          Length = 278

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 28/93 (30%), Positives = 43/93 (46%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRF 172
           L LRR    L +LY++  G+   +    +   R +       S    YY E  +++  ++
Sbjct: 183 LELRRTMARLTLLYKLSRGQIDIDTSTYL---RPHQDLRTRNSHNFKYYQE--KATKNKY 237

Query: 171 QRSFLLRTIRLWNELPSTVFPERYDMSFFKRGL 73
             SF  RTIR WN LP+ +  E   +  FKR L
Sbjct: 238 FYSFFPRTIRHWNTLPNELV-ELDSIEHFKRDL 269


>SB_18046| Best HMM Match : RVT_1 (HMM E-Value=0.34)
          Length = 837

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 29/99 (29%), Positives = 41/99 (41%)
 Frame = -1

Query: 357  EPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTV 178
            + L +RR    LC+ Y     K    +  I    +F  +    R+    Y    ++S+ +
Sbjct: 735  DSLEVRRQLAQLCLFY-----KIRNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 787

Query: 177  RFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 61
                SF  RTIR WN LPS V  E   +  FK     VL
Sbjct: 788  SHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFKSSALPVL 825


>SB_43828| Best HMM Match : XPG_N (HMM E-Value=1.8)
          Length = 174

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 28/93 (30%), Positives = 43/93 (46%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRF 172
           L LRR    L +LY++  G+   +    +   R +       S    YY E  +++  ++
Sbjct: 79  LELRRTMARLTLLYKLSRGQIDIDTSMYL---RPHQDLRTRNSHNFKYYQE--KATKNKY 133

Query: 171 QRSFLLRTIRLWNELPSTVFPERYDMSFFKRGL 73
             SF  RTIR WN LP+ +  E   +  FKR L
Sbjct: 134 FYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 165


>SB_19117| Best HMM Match : XPG_N (HMM E-Value=1.8)
          Length = 361

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 28/93 (30%), Positives = 43/93 (46%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRF 172
           L LRR    L +LY++  G+   +    +   R +       S    YY E  +++  ++
Sbjct: 266 LELRRTMARLTLLYKLSRGQIDIDTSMYL---RPHQDLRTRNSHNFKYYQE--KATKNKY 320

Query: 171 QRSFLLRTIRLWNELPSTVFPERYDMSFFKRGL 73
             SF  RTIR WN LP+ +  E   +  FKR L
Sbjct: 321 FYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 352


>SB_4935| Best HMM Match : Pox_F16 (HMM E-Value=5.3)
          Length = 243

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 29/99 (29%), Positives = 41/99 (41%)
 Frame = -1

Query: 357 EPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTV 178
           + L +RR    LC+ Y     K    +  I    +F  +    R+    Y    ++S+ +
Sbjct: 141 DSLEVRRQLAQLCLFY-----KIRNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 193

Query: 177 RFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 61
               SF  RTIR WN LPS V  E   +  FK     VL
Sbjct: 194 SHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 231


>SB_33076| Best HMM Match : Put_DNA-bind_N (HMM E-Value=8.4)
          Length = 152

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 29/99 (29%), Positives = 41/99 (41%)
 Frame = -1

Query: 357 EPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTV 178
           + L +RR    LC+ Y     K    +  I    +F  +    R+    Y    ++S+ +
Sbjct: 50  DSLEVRRQLAQLCLFY-----KIRNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 102

Query: 177 RFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 61
               SF  RTIR WN LPS V  E   +  FK     VL
Sbjct: 103 SHSYSFFPRTIRTWNLLPSEVV-ESSSIDSFKSSALPVL 140


>SB_20120| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 666

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 28/93 (30%), Positives = 43/93 (46%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRF 172
           L LRR    L +LY++  G+   +    +   R +       S    YY E  +++  ++
Sbjct: 571 LELRRTMARLTLLYKLSRGQIDIDTSMYL---RPHQDLRTRNSHNFKYYQE--KATKNKY 625

Query: 171 QRSFLLRTIRLWNELPSTVFPERYDMSFFKRGL 73
             SF  RTIR WN LP+ +  E   +  FKR L
Sbjct: 626 FYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 657


>SB_26135| Best HMM Match : RVT_1 (HMM E-Value=0.072)
          Length = 375

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 28/93 (30%), Positives = 43/93 (46%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRF 172
           L LRR    L +LY++  G+   +    +   R +       S    YY E  +++  ++
Sbjct: 280 LELRRTMARLTLLYKLSRGQIDIDTNMYL---RPHQDLRTRNSHNFKYYQE--KATKNKY 334

Query: 171 QRSFLLRTIRLWNELPSTVFPERYDMSFFKRGL 73
             SF  RTIR WN LP+ +  E   +  FKR L
Sbjct: 335 FYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 366


>SB_43541| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 581

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 28/93 (30%), Positives = 43/93 (46%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRF 172
           L LRR    L +LY++  G+   +    +   R +       S    YY E  +++  ++
Sbjct: 486 LELRRTMARLTLLYKLSRGQIDIDTNMYL---RPHQDLRTRNSHNFKYYQE--KATKNKY 540

Query: 171 QRSFLLRTIRLWNELPSTVFPERYDMSFFKRGL 73
             SF  RTIR WN LP+ +  E   +  FKR L
Sbjct: 541 FYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 572


>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 788

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 27/92 (29%), Positives = 39/92 (42%)
 Frame = -1

Query: 357 EPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTV 178
           + L +RR    LC+ Y     K    +  I    +F  +    R+    Y    ++S+ +
Sbjct: 507 DSLEVRRQLAQLCLFY-----KIRNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 559

Query: 177 RFQRSFLLRTIRLWNELPSTVFPERYDMSFFK 82
               SF  RTIR WN LPS V  E   +  FK
Sbjct: 560 SHSYSFFPRTIRTWNLLPSEVI-ESSSIDSFK 590


>SB_7946| Best HMM Match : DUF434 (HMM E-Value=7.5)
          Length = 294

 Score = 35.9 bits (79), Expect = 0.032
 Identities = 26/77 (33%), Positives = 38/77 (49%)
 Frame = -1

Query: 354 PLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVR 175
           PLS RR    L + Y+  + K + E+ + I        T + RS  HP     L  +T  
Sbjct: 205 PLSKRRQNARLTLFYKAVNKKSALEIPDNID-----RRTRQLRSS-HPDKFIELCPTTEA 258

Query: 174 FQRSFLLRTIRLWNELP 124
           ++ SF  RTI+ WN+LP
Sbjct: 259 YKNSFFCRTIKEWNKLP 275


>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
          Length = 2386

 Score = 35.9 bits (79), Expect = 0.032
 Identities = 24/81 (29%), Positives = 35/81 (43%)
 Frame = -1

Query: 357 EPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTV 178
           + L +RR    LC+ Y     K    +  I    +F  +    R+    Y    ++S+ +
Sbjct: 403 DSLEVRRQLAQLCLFY-----KIRNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 455

Query: 177 RFQRSFLLRTIRLWNELPSTV 115
               SF  RTIR WN LPS V
Sbjct: 456 SHSYSFFPRTIRTWNLLPSEV 476


>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
          Length = 2075

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = -1

Query: 225  SRIHPYYLEPLRSSTVRFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSD 55
            SR H      L+++ + F  SF  RTIR WN LP+ V     D+  FK  L   +S+
Sbjct: 1627 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSALAPAISE 1682


>SB_31120| Best HMM Match : Pox_F16 (HMM E-Value=5)
          Length = 284

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 28/99 (28%), Positives = 41/99 (41%)
 Frame = -1

Query: 357 EPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTV 178
           + L +RR    LC+ Y     K    +  I    +F  +    R+    Y    ++S+ +
Sbjct: 182 DSLEVRRQLAQLCLFY-----KIRNNLVNIALPQQFQPNLRPSRTNSSKY--NQIQSNVL 234

Query: 177 RFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRVL 61
               SF  RTIR WN LP+ V  E   +  FK     VL
Sbjct: 235 SHSYSFFPRTIRTWNLLPAQVV-ESSSIDSFKSSALPVL 272


>SB_48112| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 232

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 29/95 (30%), Positives = 44/95 (46%)
 Frame = -1

Query: 357 EPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTV 178
           +PL  RR   SL +L    +      + +++  SR     A  R++   +Y  P  + T 
Sbjct: 144 QPLEDRRRTSSLVLLNSGLNNASILPLEDLMKPSR-----ALPRTQHSEFYTIP-NARTD 197

Query: 177 RFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGL 73
            ++ SFL R +RLWN LP +V   R     F  GL
Sbjct: 198 IYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHAGL 232


>SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 372

 Score = 35.1 bits (77), Expect = 0.056
 Identities = 24/76 (31%), Positives = 34/76 (44%)
 Frame = -1

Query: 342 RRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRFQRS 163
           +R   S  IL+  FH          +  +R   ST R        Y   L+++T+ F  S
Sbjct: 266 QRRLTSQAILFYKFHNSLIHAKLPDL-VTRSTRSTRRKE-----LYYNQLQANTLAFNYS 319

Query: 162 FLLRTIRLWNELPSTV 115
           F  R IR+WN LP+ V
Sbjct: 320 FFARAIRIWNLLPNDV 335


>SB_37654| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 865

 Score = 34.7 bits (76), Expect = 0.074
 Identities = 22/83 (26%), Positives = 34/83 (40%)
 Frame = -1

Query: 357  EPLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTV 178
            + L  RR    L + Y++  G    +    +      + T       + + L P + +  
Sbjct: 767  QSLQHRRIVSDLALFYKINSGLVKIDFLPDVSPKPAVYFTRTSACNSYQFSLLPAKINAF 826

Query: 177  RFQRSFLLRTIRLWNELPSTVFP 109
             F  SF  RTI +WN LP  VFP
Sbjct: 827  LF--SFYSRTIPVWNALPQAVFP 847


>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
          Length = 654

 Score = 34.7 bits (76), Expect = 0.074
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
 Frame = -1

Query: 354 PLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVR 175
           P+  R  F  L + ++  HG   + + E++      HS    RS        P   S V 
Sbjct: 541 PVEFRVKFKILLLTFKAIHGIAPQYLSELVTIKP--HSAYNLRSNSGGKLQPPRIKSLVT 598

Query: 174 F-QRSFLLRTIRLWNELP---STVFPERYDMSFFKRGLWR 67
           F  RSF +   +LWN LP   S     R++ +  KRG +R
Sbjct: 599 FGDRSFEISAPKLWNSLPLEISNGKSFRHEKTKKKRGSYR 638


>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3142

 Score = 34.7 bits (76), Expect = 0.074
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = -1

Query: 225  SRIHPYYLEPLRSSTVRFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGLWRVLSD 55
            SR H      L+++ + F  SF  RTIR WN LP+ V     D+  FK  L   + D
Sbjct: 1073 SRRHSRTYHQLQANILAFNYSFFPRTIRTWNLLPAEVV-NAADLPSFKSALAPAIID 1128


>SB_40344| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 401

 Score = 34.7 bits (76), Expect = 0.074
 Identities = 26/77 (33%), Positives = 37/77 (48%)
 Frame = -1

Query: 354 PLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVR 175
           PLS RR    L + Y+  + K + ++ + I        T + RS  HP     L   T  
Sbjct: 314 PLSKRRQDARLTLFYKAVNKKSALKIPDNID-----RRTRQLRSS-HPDKFIELCPRTEA 367

Query: 174 FQRSFLLRTIRLWNELP 124
           F+ SF  RTI+ WN+LP
Sbjct: 368 FKNSFFCRTIKEWNKLP 384


>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
          Length = 1280

 Score = 34.3 bits (75), Expect = 0.098
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 207  YLEPLRSSTVRFQRSFLLRTIRLWNELPSTV 115
            Y   L+++T+ F  SF  R IR+WN LP+ V
Sbjct: 1221 YCNQLQANTLTFNYSFFARAIRIWNLLPNDV 1251


>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 824

 Score = 34.3 bits (75), Expect = 0.098
 Identities = 27/93 (29%), Positives = 43/93 (46%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRF 172
           L LRR    L +LY++  G+   +    +      H   R R+  H +     +++  ++
Sbjct: 729 LELRRTMARLTLLYKLSRGQIDIDTNMYLRP----HQDLRTRNS-HNFKCYQEKATKNKY 783

Query: 171 QRSFLLRTIRLWNELPSTVFPERYDMSFFKRGL 73
             SF  RTIR WN LP+ +  E   +  FKR L
Sbjct: 784 FYSFFPRTIRHWNTLPNELV-ELGSIEHFKRDL 815


>SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5)
          Length = 210

 Score = 34.3 bits (75), Expect = 0.098
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 207 YLEPLRSSTVRFQRSFLLRTIRLWNELPSTV 115
           Y   L+++T+ F  SF  R IR+WN LP+ V
Sbjct: 151 YYNQLQANTLAFNYSFFARAIRIWNLLPNDV 181


>SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 315

 Score = 34.3 bits (75), Expect = 0.098
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 207 YLEPLRSSTVRFQRSFLLRTIRLWNELPSTV 115
           Y   L+++T+ F  SF  R IR+WN LP+ V
Sbjct: 256 YYNQLQANTLAFNYSFFARAIRIWNLLPNDV 286


>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
          Length = 570

 Score = 34.3 bits (75), Expect = 0.098
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 207 YLEPLRSSTVRFQRSFLLRTIRLWNELPSTV 115
           Y   L+++T+ F  SF  R IR+WN LP+ V
Sbjct: 511 YYNQLQANTLAFNYSFFARAIRIWNLLPNDV 541


>SB_14726| Best HMM Match : Ribosomal_L30 (HMM E-Value=6.6)
          Length = 231

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = -1

Query: 216 HPYYLEPLRSSTVRFQRSFLLRTIRLWNELPSTVFPERYDMSFFKRGL 73
           H  +   L + T  ++ SFL R +RLWN LP +V   R     F  GL
Sbjct: 184 HSEFYTILNARTDIYKYSFLPRALRLWNNLPQSVIDMRGCPEAFHSGL 231


>SB_2897| Best HMM Match : RVT_1 (HMM E-Value=3e-33)
          Length = 609

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 23/77 (29%), Positives = 36/77 (46%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRF 172
           L LRR    L +LY++  G+   +    +   R +       S    YY E  +++  ++
Sbjct: 512 LELRRTMARLTLLYKLSRGQIDIDTSMYL---RPHQDLRTRNSHNFKYYQE--KATKNKY 566

Query: 171 QRSFLLRTIRLWNELPS 121
             SF  RTIR WN LP+
Sbjct: 567 FYSFFPRTIRHWNTLPN 583


>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
          Length = 698

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 24/77 (31%), Positives = 39/77 (50%)
 Frame = -1

Query: 354 PLSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVR 175
           PLS RR    L + Y+  + K + ++ + I        T + RS +   ++E L   T  
Sbjct: 611 PLSKRRQDARLTLFYKAVNKKSALKIPDNID-----RRTRQLRSSLPDKFIE-LCPRTEA 664

Query: 174 FQRSFLLRTIRLWNELP 124
           ++ SF  RTI+ WN+LP
Sbjct: 665 YKNSFFCRTIKEWNKLP 681


>SB_51961| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 193

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 225 SRIHPYYLEPLRSSTVRFQRSFLLRTIRLWNELPSTV 115
           +R H +    L+S+ + +  SF  R IR+WN LPS V
Sbjct: 122 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 158


>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
          Length = 888

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = -1

Query: 267 IPASRFYHSTARHRSRIHPYYLEPLRSSTVRFQRSFLLRTIRLWNELPSTVFPERY 100
           +P S       R     HP + +   + T  F+ SF+ R IRLWN L  TV    Y
Sbjct: 713 LPLSTLSKPLRRSERTSHPEHYDIPYARTNIFKYSFVPRAIRLWNSLEVTVVLAAY 768


>SB_17278| Best HMM Match : RVT_1 (HMM E-Value=0.0082)
          Length = 506

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 225 SRIHPYYLEPLRSSTVRFQRSFLLRTIRLWNELPSTV 115
           +R H +    L+S+ + +  SF  R IR+WN LPS V
Sbjct: 441 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 477


>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
          Length = 1492

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 225  SRIHPYYLEPLRSSTVRFQRSFLLRTIRLWNELPSTV 115
            +R H +    L+S+ + +  SF  R IR+WN LPS V
Sbjct: 1427 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 1463


>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
          Length = 452

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -1

Query: 225 SRIHPYYLEPLRSSTVRFQRSFLLRTIRLWNELPSTV 115
           +R H +    L+S+ + +  SF  R IR+WN LPS V
Sbjct: 387 TRRHNHSFLQLQSNILSYNYSFFPRAIRIWNLLPSNV 423


>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
          Length = 3891

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 158  CYVPSGYGMSSPPRCFPSAMTCPSSNEAC 72
            C  P GY + +P RC  S  +C SS  AC
Sbjct: 2147 CSCPQGYRLENPYRCVLSNASCASSEFAC 2175



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 194  CGHPQCVSRDLFCYVPSGYGMSSPPRCFPSAMTCPSSNEAC 72
            C   +C+SRD  C   +  G SS  +     +TCP+    C
Sbjct: 3053 CPSGRCISRDWLCDGDNDCGDSSDEKAGECHVTCPAGQARC 3093


>SB_30049| Best HMM Match : FBA_2 (HMM E-Value=7)
          Length = 282

 Score = 31.5 bits (68), Expect = 0.69
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 195 LRSSTVRFQRSFLLRTIRLWNELPSTV 115
           L+S+ + +  SF  R IR+WN LPS V
Sbjct: 227 LQSNILSYNYSFFARAIRIWNLLPSNV 253


>SB_28584| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 184

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -1

Query: 333 FGSLC-ILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRFQRSFL 157
           F S+C ++Y   +G     +  +   ++  HS     S  + +Y++  R    R   SF 
Sbjct: 69  FESVCHLMYDTRNGTAPPNILNLFTDTKSVHSYNTRSSTSNKFYIQKSRLEIQR--NSFS 126

Query: 156 LRTIRLWNELPSTV 115
               R+WNELP ++
Sbjct: 127 RVGARVWNELPQSL 140


>SB_2368| Best HMM Match : Patched (HMM E-Value=8.6e-08)
          Length = 1420

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 198 APGSMDEFYSGGGRCYGKNEMPV 266
           AP S+++F  GGG C G+N +PV
Sbjct: 770 APTSLEDFKWGGGPCLGENGVPV 792


>SB_19530| Best HMM Match : EMI (HMM E-Value=3.5)
          Length = 244

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRF 172
           L  RR+   L   YR+  G  SE         + Y  T ++    HP     +   T  F
Sbjct: 158 LKERREKARLAFFYRINKG-LSEISMPPYATPQMYTITRQY----HPQRFALVSCKTNVF 212

Query: 171 QRSFLLRTIRLWNELP-STV 115
           + SF    IR+WN LP ST+
Sbjct: 213 KESFFPHAIRMWNGLPVSTI 232


>SB_31047| Best HMM Match : CHORD (HMM E-Value=6.2)
          Length = 251

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 22/76 (28%), Positives = 33/76 (43%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRF 172
           L +RR    L + Y++ HG    +    +P     +  +RH       Y  P  S+    
Sbjct: 160 LEIRRKRARLLMFYKIHHGLVVTDGLPAVPPM---YIISRHMKS--QSYKVPPSSTDYHK 214

Query: 171 QRSFLLRTIRLWNELP 124
           ++SF   TIR WN LP
Sbjct: 215 KKSFFPPTIRDWNCLP 230


>SB_24816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 662

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRF 172
           L  RR+   L   YR+  G  SE         + Y  T ++    HP     +   T  F
Sbjct: 576 LKERREKARLAFFYRINKG-LSEISTPPYATPQMYTITRQY----HPQRFALVSCKTNVF 630

Query: 171 QRSFLLRTIRLWNELP-STV 115
           + SF    IR+WN LP ST+
Sbjct: 631 KESFFPHAIRMWNGLPVSTI 650


>SB_25515| Best HMM Match : Complex1_LYR (HMM E-Value=9.6)
          Length = 304

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
 Frame = -1

Query: 351 LSLRRDFGSLCILYRMFHGKCSEEM-FEII--PASRFYHSTARHRSRIHPYYLEPLRSST 181
           L LRR      + Y++ HG    +   ++I  P S    S+ R+  ++    L P   S 
Sbjct: 208 LELRRTVFDSVMFYKIHHGLVKIDFPSDVIRKPGSYATRSSVRNTCQLT---LPP--PSI 262

Query: 180 VRFQRSFLLRTIRLWNELP 124
            +F+ SF  RTI +WN LP
Sbjct: 263 NQFKYSFFSRTIPVWNSLP 281


>SB_47421| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 323

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -1

Query: 297 GKCSEEMFEIIPASRFYHSTARH-RSRIHPYYLEPLRSSTVRFQRSFLLRTIRLWNELPS 121
           G  +E  F +    R+  +T RH R  I   Y      STV    SFL+  +  W++  +
Sbjct: 60  GLTTEPFFAVYYVERY--TTKRHIRQGILVLYQIGQFVSTVAISSSFLIVLVLSWSQCVA 117

Query: 120 TVFPERY 100
             +P RY
Sbjct: 118 ITYPHRY 124


>SB_57001| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1487

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +1

Query: 223  TPVAGGAMVKTRCRYNLEHFLRALPMEHTVQNTEGTEVPPQTQRFQTIRECL 378
            T   G +M +    +  +HFL  L +       EG +   Q+Q   TIR+ L
Sbjct: 1151 TLTPGSSMAELSVAFRQQHFLVGLLLSELAMALEGCDFNLQSQAIDTIRDLL 1202


>SB_53803| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 619

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 25/87 (28%), Positives = 37/87 (42%)
 Frame = -2

Query: 329 VPSVFCTVCSMGSALRKCSRLYRHLVFTIAPPATGVEFIHTTWSHCGHPQCVSRDLFCYV 150
           VP+V  TV ++ S +        ++VF+   P  G   IH+T   CG PQC      C +
Sbjct: 393 VPNVVFTVPNVVSTVPNVVSTVPNVVFS---PQCG---IHST--QCGSPQCGIHSTQCGI 444

Query: 149 PSGYGMSSPPRCFPSAMTCPSSNEACG 69
            S       P+C   +  C   +  CG
Sbjct: 445 HSTQCGIHSPQCGIHSPQCGIHSTQCG 471


>SB_26191| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 168

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -1

Query: 216 HPYYLEPLRSSTVRFQRSFLLRTI-RLW 136
           HPYY E + SS + F+ + ++RTI R W
Sbjct: 78  HPYYSERMLSSVLLFRENGIIRTIQREW 105


>SB_45836| Best HMM Match : EGF (HMM E-Value=6.7e-21)
          Length = 1332

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -1

Query: 285 EEMFEIIPASRFYHSTARHRSRIHPYYLEPLRSSTVRFQRSFLLRTI 145
           +E+ EII  +    + +R R     YY+E L+S+ ++ +   LL T+
Sbjct: 511 QELAEIIDTAISQSTKSRKRRSSPEYYVEILKSTAIKDESKTLLTTV 557


>SB_35989| Best HMM Match : SEC-C (HMM E-Value=3.5)
          Length = 203

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = -1

Query: 438 PTAYKIGLTFTLSRTLKNSY*ALTDRLEPLSLRRDFGSLCIL-----YRMFHGKCSEEMF 274
           PT Y      ++      +Y + T  LE L L R +   C+      YR+FHGK +  M 
Sbjct: 128 PTEYARRFVSSIRVVCDTTYMSETLNLEML-LERRYKEKCVNGSGSPYRLFHGKLNANMI 186

Query: 273 EIIPASRFY 247
             IP+S  Y
Sbjct: 187 R-IPSSSHY 194


>SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21)
          Length = 447

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -2

Query: 269 LYRHLVFTIAPPATGVEFIHTTWSHCGHPQCVSRDLFC 156
           L + LV     P TG+    TTW   G PQ    D+ C
Sbjct: 28  LDKSLVIWQPDPDTGIWIETTTWHEIGRPQVHGYDMQC 65


>SB_37127| Best HMM Match : DUF352 (HMM E-Value=3.3)
          Length = 256

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 253 TRCRYNLEHFLRALPMEHTVQNTEGTEVPPQTQRFQTIR 369
           T CR+ L   +    + HTVQN+        TQ+++T+R
Sbjct: 26  TVCRFELNRLM----IHHTVQNSTHKSTEQYTQQYRTVR 60


>SB_8123| Best HMM Match : Tfb2 (HMM E-Value=0.00019)
          Length = 448

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -1

Query: 156 LRTIRLWNELPSTVFPERYDM-SFFKRGLWRVLSDRQRLGSAPGIA 22
           L+ +R+W E+PS V  +RY+M + F+  +   L   +  GS P I+
Sbjct: 58  LKQLRIWREVPSGVH-KRYEMNATFRTNMKAALCGGESPGSNPIIS 102


>SB_7214| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 505

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 594 HRHLQLKCTTHLEI*VLRSQYSYKGCPTLRTETHYCFTALDSLPTFAT 451
           H H++L  T H  I +  +Q+S+   P+ +    Y  T LDS  T+ T
Sbjct: 351 HSHIRLPSTQHSHIRLPSTQHSHIRIPSTQPAFTYT-TPLDSALTYTT 397


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,097,052
Number of Sequences: 59808
Number of extensions: 536014
Number of successful extensions: 1363
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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