Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1111
(564 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 39 4e-04
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 36 0.005
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 35 0.007
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 35 0.009
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 34 0.017
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 33 0.022
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 29 0.47
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 29 0.47
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 27 1.9
SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr 3|||... 27 2.5
SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis Mei2... 26 3.3
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 26 4.4
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 4.4
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 26 4.4
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 26 4.4
SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|ch... 25 5.8
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 25 5.8
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 5.8
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 39.1 bits (87), Expect = 4e-04
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 310 MNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSRLEMGAVADLFDRNGSGLID 489
+N+ S L LF + DK G + + + GI KF + + +L+D NG G +D
Sbjct: 574 INNSSSFLRHLFLRFDKSMTGSLSLQDLVSGIAELKFRDVMRNISFIFELYDFNGDGFMD 633
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 35.5 bits (78), Expect = 0.005
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 325 SRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDT-SRLEMGAVADLFDRNGSGLIDWEEF 501
+ L D+ ++D D NG I EF+ + DT + E+ +FD++G+G I EE
Sbjct: 48 AELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEEL 107
Query: 502 IAAL 513
L
Sbjct: 108 THVL 111
Score = 32.7 bits (71), Expect = 0.038
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 322 KSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSRLEMGAVADLFDRNGSGLIDWEEF 501
+ + + F+ DKD NG I E + + S+ E+ + D +G G+I++EEF
Sbjct: 84 EEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEF 143
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 35.1 bits (77), Expect = 0.007
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +1
Query: 307 FMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSRLEMGAVADLFDRNGSGLI 486
F N + R+ F K+D + +G I RNEF+ I + + + +V D +G G +
Sbjct: 18 FSNEEIERIRKRFIKIDANQSGSIDRNEFL-SIPSVASNPLASRLFSVV---DEDGGGDV 73
Query: 487 DWEEFIAAL 513
D++EFI +L
Sbjct: 74 DFQEFINSL 82
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 34.7 bits (76), Expect = 0.009
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 322 KSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSRLEMGAVADLFDRNGSGLIDWEEF 501
+S LF K+D +N G I E + + + D+ E+ + D D G ID +EF
Sbjct: 301 RSNFYQLFSKIDNENKGYIVGGEAVPFFMASHLDSE--ELARIWDTVDTQDRGYIDKDEF 358
Query: 502 IAAL 513
A+
Sbjct: 359 AVAM 362
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 33.9 bits (74), Expect = 0.017
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +1
Query: 250 ELQRVSNFSWDDW-RKRFLKFMNHK------KSRLTDLFRKMDKDNNGLIPRNEFIDGIV 408
EL ++SN D K+F+ F+++K + FR DKDN+G I +F D +
Sbjct: 46 ELAKLSNELGDAIDEKKFMSFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMK 105
Query: 409 NTKFDTSRLEMGAVADLFDRNGSGLIDWEEFI 504
S E+ + D SG D+ +F+
Sbjct: 106 TLGEKLSDNEVQLMVQEADPTNSGSFDYYDFV 137
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 33.5 bits (73), Expect = 0.022
Identities = 16/78 (20%), Positives = 35/78 (44%)
Frame = +1
Query: 301 LKFMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSRLEMGAVADLFDRNGSG 480
++ ++ + + F+ D D + I +E + F+ + E+ + FD+ G G
Sbjct: 29 VEITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKG 88
Query: 481 LIDWEEFIAALRPDWVER 534
+ E+F+ + VER
Sbjct: 89 YLQMEDFVRVMTEKIVER 106
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 29.1 bits (62), Expect = 0.47
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 340 LFRKMDKDNNGLIPRNEFIDGIVNTKFDTSRLEMGAVADLFDRNGSGLIDWEEFI 504
+F D D NG I EFI + T ++ L+D + +GLI ++E +
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEML 122
Score = 26.2 bits (55), Expect = 3.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 448 VADLFDRNGSGLIDWEEFIAAL 513
V ++FD + +G ID++EFI AL
Sbjct: 68 VFNVFDADKNGYIDFKEFICAL 89
Score = 25.8 bits (54), Expect = 4.4
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Frame = +1
Query: 343 FRKMDKDNNGLIPRNE---FIDGIVN-----TKF----DTSRLEMGAVADLFDRNGSGLI 486
F+ D DNNGLI +E +D I K DT + + ++ D+N G +
Sbjct: 105 FQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQL 164
Query: 487 DWEEFIAALRPD 522
EEF + D
Sbjct: 165 TLEEFCEGSKRD 176
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 29.1 bits (62), Expect = 0.47
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = +1
Query: 289 RKRFLKFMNHKKSRLTDLFRKMDKDNNGLIPRNEFIDGIVNTKFDTSRLEMGAVADLFDR 468
+K++ + N + LTD F K+D D G + + I ++K + A+ ++ +
Sbjct: 7 QKKYPELTNEEILTLTDQFNKLDVDGKGYLDQPTTIKAFEDSKKGSYDEVREAIREV-NV 65
Query: 469 NGSGLIDWEEFI 504
+ SG ++ E+F+
Sbjct: 66 DSSGRVEPEDFV 77
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 199 LAWERQRRLHERLAHLKE-LQRVSNFSWDDWRKRFLKFMNHKKSRL 333
L+ + +R++HERL LK+ +Q+ W +R ++F+ + L
Sbjct: 8 LSRDLERKIHERLVSLKDTIQQTEIEEWPVSTRRAIQFVQERDMSL 53
>SPCP20C8.01c |||B13958 domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 247
Score = 26.6 bits (56), Expect = 2.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 340 LFRKMDKDNNGLIPRNEFIDGIVNTKFDTSRLEM 441
+F KMD N + R + + +N++FDT + EM
Sbjct: 111 IFSKMDSMQNDMNSRFDAMQNEMNSRFDTVQNEM 144
>SPAC27D7.03c |mei2||RNA-binding protein involved in meiosis
Mei2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 750
Score = 26.2 bits (55), Expect = 3.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 437 RWAPWRICSTGTVAASSTGRSSLRRFALTGWNAADPRP 550
+W+P+ +TG V S TG +RR G NA+ P
Sbjct: 501 QWSPFS-SNTGKVFDSPTGSLGMRRSLTVGANASCSNP 537
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 394 IDGIVNTKFDTSRLEMGAVADLFDRNGSGLIDWEEFIAALRPDWV 528
+ G+ + SR +G V ++ NG+ L +W + A W+
Sbjct: 541 LHGLTTIGWILSRENLGIVENIMQNNGTNLKNWRILLKASYKFWL 585
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 208 ERQRRLHERLAHLKELQRVSNFSWDDWRK 294
ER+ +L +L LKE Q + +W++ RK
Sbjct: 372 ERREKLESKLTDLKEEQDKLSAAWEEERK 400
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 495 LPVDEAATVPVEQIRHGAHLQPGCVE-FGVDDAIDELVPR 379
LP+ + T PV+ +R+ ++ PG E V+ D +PR
Sbjct: 36 LPIVKTHTYPVDFLRNNGNVMPGQSELLPVESTEDITIPR 75
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 197 SHTLRHLSHSCFTRGDLNSGSAPLLP 120
SHTL LS T +L+S +PL P
Sbjct: 366 SHTLSELSSPALTSENLSSKPSPLFP 391
>SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 274
Score = 25.4 bits (53), Expect = 5.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 256 QRVSNFSWDDWRKRFLKFMNHKKSRLTDLFRKMDKDNN 369
+R + F R+R + KKSRLT F++ K++N
Sbjct: 13 ERTNGFDHKHSRRRGSQNRISKKSRLTYKFKRASKEHN 50
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 25.4 bits (53), Expect = 5.8
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 557 SASVGGPRRSTQSGRSAAMNSSQSMRPLPFLSNRSATAPISSRDVSN 417
SA+ S+ +GRSA MNS+ + ++S T P S VS+
Sbjct: 202 SAAASASALSSDTGRSATMNSTTFPTA---MKSQSTTKPTLSNSVSS 245
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 5.8
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -2
Query: 521 SGRSAAMNSSQSMRPLPFL----SNRSATAPISSRDVSNLVLTMPSMNS 387
SG + + NSSQ+ P S+ SAT I+ +S V + SMNS
Sbjct: 759 SGYTISSNSSQNSASEPQTAFTSSSSSATPTITQSSISTSVSSQSSMNS 807
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,149,840
Number of Sequences: 5004
Number of extensions: 43917
Number of successful extensions: 202
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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